Detailed information on CNT30221717


BLAST search results

BLAST vs Swiss-Prot:
sp|A5H453|PER42_MAIZE, E-value = 1e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693017Hordeum vulgareOryza sativa38.467.1284.2195forward
CNT30673410Hordeum vulgareSetaria viridis21.862594.4454forward
CNT30521160Hordeum vulgareSetaria italica31.9815.1686.0879forward
CNT30290573Hordeum vulgareTriticum aestivum48.5842.2586.67120forward
CNT30101385Hordeum vulgareOryza rufipogon27.534.8389.7168forward

Expression of CNT30221717

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MYACVEHMAGRHEVECTCTRASRVARTVMSAQETVGPQAAWTAARMRSMRSRATGRSVSATRSPT

Sequence

>CNT30221717
GTACTCGTTGATTAATCGGTTCTGCTCAGGTTGAAAATATCGTCTGACATATGTACGCTTGTGTGGAGCATATGGCCGGCAGGCATGAAGTGGAGTGTAC
CTGTACGAGGGCGTCACGGGTGGCGAGGACGGTGATGTCGGCGCAGGAGACGGTCGGGCCGCAGGCGGCATGGACGGCGGCGCGGATGCGCTCGATGAGG
TCGAGAGCAACGGGGCGGAGCGTCTCCGCCACGAGGTCCCCCACGAT