Detailed information on CNT30221643


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672091Hordeum vulgareSetaria viridis22.0219.6390.5985forward
CNT30276136Hordeum vulgareChenopodium quinoa20.7315.5386.2580forward
CNT30386996Hordeum vulgareTriticum turgidum95.8568.3994.59370forward
CNT30659761Hordeum vulgareTriticum dicoccoides97.4178.6692.02376forward
CNT30680223Hordeum vulgareTriticum urartu95.677.291.87369forward
CNT3039307Hordeum vulgareMarchantia polymorpha19.9523.1984.4277forward

Expression of CNT30221643

Peptides detected in this lncRNA

>peptide 1 (36 aa)
RKKQTKNQLKIDVQVDALSHHWFIFYKSPSPSSSPM*

Sequence

>CNT30221643
CGCAAAAAACAAACAAAAAATCAGCTCAAGATTGATGTACAAGTGGATGCATTGAGTCACCATTGGTTCATATTTTACAAATCACCAAGTCCCAGCAGCT
CTCCTATGTGATCGGACCAGCATTATAATCAACAAAGGATCTTTGCGATACCCTCTCATCCATCACTCGTCATACAAAACCAAAGCACGTTCGTTACACG
GACGCGCGTTCGTCCATTTTGCAGCTGAGCTGACAGAAACTGCTCGACCACCGACCACTTAAGAGGAGCCGAAGCCGAGGAAGGCGACCATGGCGAGGCG
GGCGTGCTTGATCTCCGCCAGCTGCAGAGTCTCCTTCTTCTCCGGGTCCGCCGCGAGTCCCAGCGGGTCGAAGTAGGAGCCTCCGG