Detailed information on CNT30221457


BLAST search results

BLAST vs Swiss-Prot:
sp|Q1KXR1|TI214_HELAN, E-value = 2e-12

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30556131Hordeum vulgareOryza glaberrima65.7541.0794.35407reverse complement
CNT30689544Hordeum vulgareTriticum urartu27.462.7298.82170reverse complement
CNT30371210Hordeum vulgareOryza glumipatula31.3496.5291.24194forward
CNT30575902Hordeum vulgareOryza barthii28.7659.1491.01178reverse complement

Expression of CNT30221457

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVYQFHKLHIAINKSAKFFLLYLDRRNISSI*

>peptide 2 (31 aa)
REFRIFMSFNSRTRNWKVKEGDPSFCNENNI*

>peptide 3 (57 aa)
VENLEYLCLSILVLVIGKLRKETHHFAMKTTYKTVDNFEIRPSVLIHMQKNSLLAHH*

Sequence

>CNT30221457
GTAGAGAATTTAGAATATTTATGTCTTTCAATTCTCGTACTCGTAATTGGAAAGTTAAGGAAGGAGACCCATCATTTTGCAATGAAAACAACATATAAAA
CTGTGGACAATTTCGAAATCAGGCCAAGCGTCTTAATACATATGCAAAAAAATTCATTATTGGCCCACCATTGATTAGAAGATTTAGCTTGTATGAATCG
CTATTGGTTTGATACGAATAATGGCAATCGTTTCAGTATGTTAAGGATACAGATGTATCCACAATTCATTTAGAGTTACTTAATAGTCTATTTCTTATAC
CATATCTCTATCTCGTGAAATTCTCGAGCCAAAAGATGGATGCCTATGATGTGTTTCATTTTCCTAAATGATATCAATTAAATGGTGTATCAATTCCATA
AATTGCATATAGCAATAAATAAATCAGCAAAATTCTTTCTACTATATTTAGATAGAAGAAACATTTCTTCTATCTAAAATAGTAGAAAGAATGTACCCTT
CTATCCAAATCCAATTTGCATCGATAAAAAAAATCCAAATTCCAGTAGTAGATGAATAATTGCAAATTTGTGTGTGTACGAGATTAGAATAACTTCAAAA
TAACTGACATAATTTTTTA