Detailed information on CNT30221329


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671994Hordeum vulgareSetaria viridis26.6218.6898.32119forward
CNT30554380Hordeum vulgareOryza glaberrima22.379.0591100forward
CNT30496270Hordeum vulgareDigitaria exilis22.610.2397.03101forward
CNT30556500Hordeum vulgarePanicum hallii26.1719.999.15117forward

Expression of CNT30221329

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MVVCSGSLRWVAQLLSGPLPVAAACTAKPRKATMARRASLRGRASSPARTRGTSGGRTPPRRAGTGWT*

Sequence

>CNT30221329
GTGGATGCATTGAGTCACCATTGGTTCATATTTTACAAATCACCAAGTCCCAGCAGCTCTCCTATGTGATCGGACCAGCATTATAATCAACAAAGGATCT
TTGCGATACCCTCTCATCCATCACTCGTCATACAAAACCAAAGCACGTTCGTTACACGGACGCGCGTTCGTGTCGAAGATGGTGGTGTGCAGCGGGTCGC
TGAGGTGGGTGGCCCAGTTGTTGAGCGGACCCTTGCCGGTGGCGGCGGCCTGCACGGCGAAGCCGAGGAAGGCGACCATGGCGAGGCGGGCGAGCCTCCG
GGGTAGAGCCTCCTCTCCGGCTCGCACTCGCGGAACCTCTGGAGGCCGAACACCTCCGCGTAGGGCTGGAACGGGGTGGACTTGACGTCGGCGTCCTCGA
ACCGGGTGCCGATGATCTCACCCGCCAGGTTCTGTGCAAGGTTCTGG