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Detailed information on CNT30221285

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30147862	Hordeum vulgare	Brachypodium distachyon	22.81	55.51	100	146	forward

Expression of CNT30221285

Peptides detected in this lncRNA

>peptide 1 (98 aa)
QHFTPSHSEEHLPPPSYRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPGRVSVPVWLIIRKDQLSIIGLTS*

>peptide 2 (83 aa)
NTLRPVIPKNTCPPRLTAAAGTELAGASSSSPVMIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG*

Sequence

>CNT30221285
CAACACTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTCGAGTCCTGTC
ATGATCGCGCACTCGACGAAAGAGCTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCC
CACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGACCAGCTAAGCA
TCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTACGCAGGCTCATCAAACAGCGCTTTTGAGCTTTCTTCAGGATTTGGCCCGAACTGTT
CGGCAGATTCCCACGCGTTACGCACCCGTTCGCCACTTTGTTCTCAACTATTCCGATTCCAGCAAACGGAGGCCGTTAGGTCAAAGCCGTAGCGCGCGCC
CTGTAGTTTTGAAGCAGGGCGAGACAACTTTAGCTAGGAGCCTCTTTTCCTTCTGCCCAGCTCCCCGAAAACAACGTTCGACTTGCATGTGTTAAGCATA
TAGCTAGCGTTCCTTCTGAGCCAGGATCAAACTCAGATTT