Detailed information on CNT30221194


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30436081Hordeum vulgareAegilops tauschii47.0947.5595.88243forward
CNT30720416Hordeum vulgareTriticum spelta78.2967.2290.59404forward

Expression of CNT30221194

Peptides detected in this lncRNA

>peptide 1 (42 aa)
GCRLCNRKKQTKNQLKIDVQVDALSHHWFIFYKSPSPSSSPM*

>peptide 2 (70 aa)
MVGWNGVDLTSASSNRVPMISPARFCARFWSRESTSYCRYSGACAPGNHSGRSVVGGALAFFGGAFFLPKP

Sequence

>CNT30221194
GGATGTCGTCTTTGTAATCGCAAAAAACAAACAAAAAATCAGCTCAAGATTGATGTACAAGTGGATGCATTGAGTCACCATTGGTTCATATTTTACAAAT
CACCAAGTCCCAGCAGCTCTCCTATGTGATCGGACCAGCATTATAATCAACAAAGGATCTTTGCGATACCCTCTCATCCATCACTCGTCATACAAAACCA
AAGCACGTTCGTTACACGGACGCGCGTTCGTCCATTTTGCAGCTGAGCTGACAGAAACTGCTCGACCACCGACCACTTAAGAGGAGCCGAAGGTGTCGAA
GATGGTGGGCTGGAACGGGGTGGACTTGACGTCGGCGTCCTCGAACCGGGTGCCGATGATCTCACCCGCCAGGTTCTGTGCAAGGTTCTGGTCCAGGGAG
TCCACGTCGTACTGCAGGTACTCGGGCGCCTGCGCGCCGGGGAACCACAGCGGCCGGTCGGTGGTCGGGGGCGCCTTGGCCTTCTTCGGCGGGGCCTTCT
TCTTGCCGAAGCCGAA