Detailed information on CNT30221117


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XSQ9|PIP12_ORYSJ, E-value = 2e-40

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640394Hordeum vulgareNymphaea colorata5524.289.26121forward
CNT30564991Hordeum vulgareActinidia chinensis45.912591.09101forward
CNT30541063Hordeum vulgareBrassica napus43.1811.9686.3295forward
CNT30133582Hordeum vulgareLolium perenne89.099893.88196forward
CNT30232947Hordeum vulgareAnanas comosus30.4528.2794.0367forward
CNT30129030Hordeum vulgareCorymbia citriodora20.917.895.6546forward
CNT30595794Hordeum vulgareOryza meridionalis29.0929.2298.4464forward
CNT3050369Hordeum vulgareCucumis sativus46.3622.6286.27102forward

Expression of CNT30221117

Peptides detected in this lncRNA

>peptide 1 (71 aa)
GEDHAAEGPGDALDADGGALGGGAAVAHDGEDGGHELGDAGAVEGPRLELAGLEQRRRRGLLVVLVLGPLRR

Sequence

>CNT30221117
AGGGCGAAGATCATGCCGCCGAAGGACCAGGCGATGCCCTGGATGCCGACGGTGGCGCACTTGGAGGCGGCGCCGCTGTAGCCCATGACGGTGAGGATGG
TGGCCATGAACTCGGCGATGCCGGCGCGGTAGAAGGACCACGACTTGAGCTCGCCGGGCTCGAACAGCGGCGCCGGCGGGGGCTCCTTGTAGTCCTTGTC
CTCGGACCCCTGCGCCGCCG