Detailed information on CNT30220903


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SBF3|MYB92_ARATH, E-value = 3e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695504Hordeum vulgareOryza sativa37.7514.0392.2177forward
CNT3044623Hordeum vulgarePrunus dulcis23.5310.6291.6748forward
CNT30159432Hordeum vulgarePistacia vera24.022.7593.8849forward
CNT30286652Hordeum vulgareTriticum aestivum50.9816.2883.65104forward
CNT30131948Hordeum vulgareLolium perenne94.6143.2793.78193forward
CNT30340933Hordeum vulgareEragrostis tef57.8416.2187.29118forward
CNT30367418Hordeum vulgareSorghum bicolor33.8210.3495.6569forward
CNT30596691Hordeum vulgareOryza meridionalis57.3510.2190.6117forward
CNT3021790Hordeum vulgarePopulus trichocarpa23.534.7389.5848forward
CNT30577574Hordeum vulgareOryza barthii57.351290.6117forward
CNT30117389Hordeum vulgareOryza nivara37.7512.2892.2177forward
CNT30604447Hordeum vulgareOryza punctata50.988.3391.35104forward

Expression of CNT30220903

Peptides detected in this lncRNA

>peptide 1 (66 aa)
AEAGVEGDDEALLVVGEVAALDVGAEVVGPPEAAALAAAVEPGGLGQAAPAADVPAALLDVLHQSLV

Sequence

>CNT30220903
TTGCCGAGGCCGGCGTGGAGGGCGATGATGAGGCGCTCCTCGTCGTCGGAGAAGTTGCCGCGCTTGATGTCGGGGCGGAGGTAGTTGGTCCACCGGAGGC
GGCAGCTCTTGCCGCAGCGGTTGAGCCCGGCGGCCTTGGGCAGGCCGCGCCAGCGGCCGACGTTCCCGCCGCGCTTCTGGATGTACTCCACCAAAGTCTT
GTCC