Detailed information on CNT30220900


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6Z4N6|40G2_ORYSJ, E-value = 5e-11

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30436477Hordeum vulgareAegilops tauschii36.8942.1197.66128forward
CNT30117190Hordeum vulgareOryza nivara32.8536.1984.21114forward

Expression of CNT30220900

Peptides detected in this lncRNA

>peptide 1 (60 aa)
LADGVLDGEAVVLGGPAVDLEDLVGAGRRRRLVLVVVPEPEHLGGEESVSDRLDWLELCE*

Sequence

>CNT30220900
ACTGGCCGATGGAGTGCTTGACGGCGAGGCCGTAGTCCTCGGAGGCCCGGCAGTAGATCTTGAAGATCTGGTTGGGGCCGGACGCCGCCGGCGCCTGGTC
CTTGTGGTGGTGCCCGAACCCGAACATCTTGGCGGCGAGGAGAGCGTGTCTGATCGGCTAGACTGGTTGGAGCTGTGCGAGTGAGGAGAGAGCGCTGCCC
GATGGCGCCATTATATAGAGCCGAGAGCAGAGCAGAGCAGACCAGAGTCACCACTCACGCGCTGTAGATAGTAAAATCTTGAAAATCTTTGGACCATATC
TCCAGCGGCCTGGAATAAATGGCGGAAAGTAATTGTAGGATACGCTC