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Detailed information on CNT30220832


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30366947Hordeum vulgareSorghum bicolor47.3928.5793.87408forward
CNT30152144Hordeum vulgarePrunus persica22.4290.6187.56193forward

Expression of CNT30220832

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MITRIRGFGHKDSTDPSKGVPTPGDRVIHLINYSIERPPPWMRE*

Sequence

>CNT30220832
AAAAGTACATATGTTGAGCTACTAAGGAAGTAATAACCCCTAAAGAAGCTAGAGCAAGACCTAACTGAAAATGAATCGAATTGTTGATTCTGTCATAAAG
GCCCTTATGCCCACGCCCTAATCGACCCCCCGGAGAAGTATGCGCTTCTAAAAGATCTTTAATACTGTGCCCAATTCCGAAGTTAGTTCGATACATGTGA
CCGGCAATGAGAAAAATAAATGCAATAGCTAAATGATGGTGAGCCATATCAGTCAGCCACAAACTTTGTGTTTGTGGATGGAATCCCCCAAGAAGAGTTA
GAATGGCAGTTCCCGCTCCTTGAGCGGTACCAAATAAATGATTACTCGAATCAGGGGTTTTGGGCATAAAGATTCCACTGACCCGTCAAAAGGGGTCCCA
ACCCCTGGGGATAGGGTAATACATCTAATAAATTATTCCATCGAACGTCCTCCCCCCTGGATGCGGGAATAGCAACATGAACTAAATGTCATGTCCAAGC
CAAAGAACTTACCCCGAAAAGTCCTGACAAATGATGATTGAGACGAGATTCCGCGTTTTTGAACCACGAAAGGCTTGGTTTCCATTTGGGTTGTAGATGT
AACCAACCCGCTATTAAGGACAGGTAGGCCTCTGACCATCAAATTAAATGTGAATAACCCGTCCTCCTCTCTTTGAAACAAGGGGCGCTTCCGGTTCTGT
GCGTGCTTCAAACAATTTTGTCTTCTCTCTGAGCAAGAGCTAAAGTAGCTCCTAAGAATAGTGTTATTGTACCTACTAAAGAAATAAAACTCATTATCAA
AGGTAAAGATATGAAAAGAGGAAGAAGTCGAGCTAGAAGAAAAATTCCCGCAGCAACCATT