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Detailed information on CNT30220663


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30397046Hordeum vulgareTriticum turgidum11.3524.3198.7379forward
CNT30434789Hordeum vulgareAegilops tauschii38.6573.599.63269forward

Expression of CNT30220663

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MGLVRKTRNHSHGHPTRERLLRQSIITCIQKKAPFPMETWGNTVAQFIRFRNSV*

>peptide 2 (40 aa)
MGTLAPTRGGKQGRDQGAGPRRVFPSLLVIVFVRDARFTK*

Sequence

>CNT30220663
ATCTTAAGTAGTTGAATCCGCTCCGCTAGGCACTTACAAACCTATTTATTTACAAGTTCCACATGGGTCTGGTCAGGAAGACTCGGAATCATTCTCACGG
CCACCCCACACGGGAGCGGCTTCTCCGCCAATCGATCATCACTTGCATACAAAAAAAAGCCCCTTTTCCAATGGAAACCTGGGGAAATACAGTTGCTCAA
TTCATTCGATTTCGAAATAGCGTATAAAGTGATTCTTGCAATTTCACTGCAGGCAGCGTAGCAATTCTCGCGGGAATCTCGGTCTTGTTTGGGCCGATTC
CTTAACGAGAGCCTAGTCGAAAGCGCCCATAAAAAGAGTAAATCGTTTTCGGTATGGGTACGCTGGCCCCTACGAGGGGCGGTAAGCAAGGTAGAGACCA
GGGAGCAGGACCGCGAAGGGTCTTCCCATCTCTTCTTGTTATTGTCTTTGTCCGAGATGCCCGGTTCACCAAATGATAATTCAAATCGAGATTGTGTGAA
GTAAAGATCGAGGTTTTTCTTCTTACTAACTTTGTCAAAGAGGCTAAAAAAACAATAAATGACCAACGAAACTTCGAGTGAGTAGGATAAGGAGGAGTAG
TCGGAGGATCTGAGAAGGGAATTAGAGAAAAAAGAGCAGCAGCTCAGTAATAACACCTAGGCTTTTGAATTAACTCTGCGATTTGGAAGGCGGAGG