Detailed information on CNT30220567


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3020986Hordeum vulgareCitrullus lanatus56.3313.8982.95129forward
CNT30300733Hordeum vulgareTriticum aestivum86.4694.7497.98198forward
CNT30241358Hordeum vulgareAvena sativa42.3617.5190.7297forward
CNT3067537Hordeum vulgareLeersia perrieri85.1566.190.77195forward
CNT30116966Hordeum vulgareOryza nivara44.982.8895.15103reverse complement

Expression of CNT30220567

Peptides detected in this lncRNA

>peptide 1 (61 aa)
HGFSRQFERLTYLGISGSMLIFNSPKHFVACYALPRLSVPRYPPQAFPLLNLAINVKAMPS*

Sequence

>CNT30220567
TCATGGATTCAGCAGGCAGTTTGAAAGGTTGACCTATTTGGGAATCTCCGGATCTATGCTTATTTTCAACTCCCCGAAGCATTTCGTCGCTTGCTACGCC
CTTCCTCGTCTCTCGGTGCCTAGGTATCCACCGCAAGCCTTTCCTCTTTTGAACCTCGCCATTAACGTTAAGGCTATGCCATCCTAAGGTGATACTAAAT
GGAAGGATCTTATCAACGTCCTCCTCGAC