Detailed information on CNT30219998


BLAST search results

BLAST vs Swiss-Prot:
sp|P58311|PSAA_WHEAT, E-value = 2e-71

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30655373Hordeum vulgareRosa chinensis23.641.8691.0378forward
CNT30360010Hordeum vulgareLactuca sativa37.2711.4587.8123forward

Expression of CNT30219998

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MKVHATQPKKDNGKLPEMSTKDFSRNLLQITSMTIEIVSIGM*

>peptide 2 (31 aa)
MAGSGPFLKRCFYRIPIHNNFYFWFRRTNNH*

Sequence

>CNT30219998
AGTAGGATCACTTAGCCATGCTTCATAATTGGAAAAACGGGCACCATGAAAGTACATGCCACTCAACCAAAGAAAGATAATGGAAAGTTGCCCGAAATGA
GCACTAAAGACTTTTCTAGAAATCTCCTCCAAATCACCAGTATGACTATCGAAATCGTGAGCATCGGCATGTAGGTTCCAGATCCAAGTGGTAATATCAG
GGCCCTTAGCTAGTGTTCTTGAGAAATGGCCGGGTCTGGCCCATTCCTCAAAAGATGTTTTTACAGGATCCCTATCCACAACAATTTTTACTTCTGGTTC
CGGCGAACGAATAATCATTAAGTCCTCCAC