Detailed information on CNT30219855


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30390355Hordeum vulgareTriticum turgidum95.234.2998.74238reverse complement
CNT3055442Hordeum vulgareAmborella trichopoda42.46.7485.85106forward
CNT30148543Hordeum vulgareBrachypodium distachyon94.412.6998.31236reverse complement
CNT30102868Hordeum vulgareOryza rufipogon61.268.396.73153reverse complement

Expression of CNT30219855

Peptides detected in this lncRNA

>peptide 1 (82 aa)
GSSIYDFTFMDVDKILPFSITLGWHSLNVNGEVQKRKGLRWIPRHRETRKGVASDEMLRGVENKHRSGDSQIGQPFKLPAESM

Sequence

>CNT30219855
GGCAGTTCGATCTATGATTTCACATTCATGGACGTTGATAAGATCCTTCCATTTAGTATCACCTTAGGATGGCATAGCCTTAACGTTAATGGCGAGGTTC
AAAAGAGGAAAGGCTTGCGGTGGATACCTAGGCACCGAGAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGATC
CGGAGATTCCCAAATAGGTCAACCTTTCAAACTGCCTGCTGAATCCATGA