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Detailed information on CNT30219526


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30375299Kalanchoe fedtschenkoiArabidopsis thaliana19.8621.2384.3483forward
CNT30263158Kalanchoe fedtschenkoiBrassica rapa19.8632.8184.3483forward

Expression of CNT30219526

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MAHLQWISSDSLYLSRFDGTSPSPSGVGGAGQASTRRSWRPWRKTSWS*

>peptide 2 (43 aa)
METLEKDKLVLKDEIGVAVANFDLEDERSDGKAIPQLIIEAIL*

>peptide 3 (41 aa)
MRLEWQWQILIWKMRGVMGRLSHSSSSKPFFDVRASNNLSA*

>peptide 4 (33 aa)
MAPLQVQAGWAGLARHPLGGHGDLGERQVGPER*

Sequence

>CNT30219526
GCTGCACCCAAAATTTAGGATATCACAACTCGACTAATAAGTAATAACTAAACCAAATCCTGAATGGACGCACTTATCAGGGGTGGGTCTTAGTCTAAGT
CTTACCACAGCCAGCATGGCCCATCTGCAGTGGATCAGTTCTGACTCCTTGTACCTCTCCAGATTTGATGGCACCTCTCCAAGTCCAAGCGGGGTGGGCG
GGGCTGGCCAGGCATCCACTCGGCGGTCATGGAGACCTTGGAGAAAGACAAGTTGGTCCTGAAAGATGAGATTGGAGTGGCAGTGGCAAATTTTGATTTG
GAAGATGAGAGGAGTGATGGGAAGGCTATCCCACAGCTCATCATCGAAGCCATTCTTTGACGTCAGAGCTTCCAACAACTTGTCAGCCTGAAAATGGGTC
GACCGTTGAAGAGTGCGG