Detailed information on CNT30218750


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3085348Kalanchoe fedtschenkoiVigna radiata12.1156.8587.23141forward
CNT30239222Kalanchoe fedtschenkoiBrassica oleracea19.5940.4385.53228forward
CNT3058323Kalanchoe fedtschenkoiAmborella trichopoda18.5622.8380.56216forward

Expression of CNT30218750

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGRGLLILVQILSVIEILISLEEAISFLIYR*

>peptide 2 (30 aa)
GALTKPALEIFHLVCCPRCLFAMVSPAVLV*

>peptide 3 (32 aa)
MAYMFGIDSFLRELKKHYLIERFYTSALSQRI*

>peptide 4 (36 aa)
WSPNQAGLGDISFGLLPSVFIRNGVASCACVNCCGE*

>peptide 5 (43 aa)
MQQTERYTSNKSGNCCSRTNYSSSSPSIKLSGELIPKCSYRSF*

>peptide 6 (49 aa)
MLLNYCDDFVVLRNMEGDTKVTALHKSSSNPKIYSDPEWVCRVSNLESS*

Sequence

>CNT30218750
GTGGAGCCCTAACCAAGCCGGCCTTGGAGATATTTCATTTGGTTTGTTGCCCTCGGTGTTTATTCGCAATGGTGTCGCCAGCTGTGCTTGTGTAAATTGT
TGTGGCGAGTAGATGGGCATTTGAAGTGTTTTCATGCAGCAAACTGAGAGATACACATCCAACAAGTCCGGTAACTGCTGTTCACGGACCAATTACTCGA
GCTCGAGCCCGTCAATTAAACTATCAGGTGAACTCATTCCTAAGTGTTCATACAGATCTTTCTAAGGATTGGATGCTACTAAATTATTGTGACGATTTTG
TTGTCCTTAGAAACATGGAAGGAGATACTAAAGTGACTGCACTGCATAAATCGAGTTCAAATCCCAAGATTTATTCAGACCCGGAGTGGGTTTGCCGCGT
GTCAAATTTGGAAAGTTCTTGAAGTCTCATGTCAAATGGATCCAGCCAAGTGTTAAAAGTCCATCTGAGCTGTCCAGAAACAACAAAATAAATTTTGTTG
GCTTTTAGTAGAAATTTGGGCTTAGGGTTTAAGTAAGACTGATAATAGGATTTGGACTATGGGCCGGGGCTTATTAATATTAGTCCAAATCTTATCAGTG
ATAGAAATCCTAATCAGCTTAGAAGAAGCCATTTCCTTCCTTATATATAGATAGTTGTAGTATTCTTTTTTAGTTGGATTTGTTTAGATTAAAGTTAGCT
GCTGCTTCTTTTTCCTGTATTCGCGCGTGTCGGCTAGATCGCCCATTTACTTGTCTTCAGAATCCCAACTCTTGTTATTATTTTAGATTTGCAATTTCAG
TTGCTTATTCATCTTGTTCTTGCTTGTTCTTCGATTGCTAGCAGGTACAAGGACCTTCGTGGTCAGGTTGATCGTGCTTCCGCAACATTAATAACACTTC
TGGAGTAGGTGTAACGATTGCCAAGGCGCAACATCCTGGACAATATATGTACCCTGCCGAAGTAAGGAACCATGGCATATATGTTTGGAATAGATTCCTT
TTTGAGAGAGTTGAAAAAGCACTATCTCATTGAAAGGTTCTATACATCTGCCCTTTCTCAACGCATTTGACAAAGACTCTGTTTTTTCCTATTTTCGGAT
GGTAAATCTTTCTCAGAACATGGAGTGTGAATCAAACTCATGTTTGAATTGAATTGAGATACTG