Detailed information on CNT30218428


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673303Kalanchoe fedtschenkoiSetaria viridis23.5315.6294.2352reverse complement
CNT30177118Kalanchoe fedtschenkoiSecale cereale38.913.0386.0586reverse complement
CNT30303125Kalanchoe fedtschenkoiTriticum aestivum63.3525.8384.29140forward
CNT30437030Kalanchoe fedtschenkoiAegilops tauschii28.0523.488.7162reverse complement
CNT30682627Kalanchoe fedtschenkoiTriticum urartu28.0516.4988.7162reverse complement
CNT30147600Kalanchoe fedtschenkoiBrachypodium distachyon63.357.7690.71140reverse complement

Expression of CNT30218428

Peptides detected in this lncRNA

>peptide 1 (33 aa)
TLVIRLQLSRTLRLSNRYTYSRSVIDLAEARST*

Sequence

>CNT30218428
GACGTTGGTGATCCGACTACAACTGTCCAGGACGTTGCGCCTTAGCAATCGTTACACCTACTCCAGAAGTGTTATTGATCTTGCGGAAGCACGATCAACC
TGACCACGAAGGTCCTTGTACCTGCTAGCAATCGAAGAACAAGCAAGAACAAGATGAATAAGCAACTGAAATTGCAAATCTGAAATAAAAACAAGAGTTG
GGAATTTGAAGACAAGTAAAC