« Back to Kalanchoe fedtschenkoi search


Detailed information on CNT30217689


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524056Kalanchoe fedtschenkoiSetaria italica34.679.6191.35104forward
CNT30708950Kalanchoe fedtschenkoiGlycine max2217.189.3966forward
CNT30223084Kalanchoe fedtschenkoiHordeum vulgare21.678.3395.3865forward
CNT30541563Kalanchoe fedtschenkoiBrassica napus22.6710.1988.2468forward
CNT30439071Kalanchoe fedtschenkoiAegilops tauschii32.6729.3491.8498forward
CNT30255936Kalanchoe fedtschenkoiAvena sativa26.3321.4789.8779forward
CNT30662744Kalanchoe fedtschenkoiTriticum dicoccoides3318.5491.9299forward
CNT3075914Kalanchoe fedtschenkoiBrassica juncea22.6711.2288.2468forward
CNT30462400Kalanchoe fedtschenkoiSaccharum spontaneum327.0586.4696forward
CNT307142Kalanchoe fedtschenkoiZea mays327.6790.6296forward
CNT30365786Kalanchoe fedtschenkoiSorghum bicolor23.6727.4187.3271forward
CNT30570222Kalanchoe fedtschenkoiVitis vinifera25.6715.4384.4277forward
CNT30595262Kalanchoe fedtschenkoiEragrostis curvula27.6711.589.1683forward
CNT30557232Kalanchoe fedtschenkoiPanicum hallii25.6711.5889.6177forward

Expression of CNT30217689

Peptides detected in this lncRNA

>peptide 1 (74 aa)
EVENGLISLPRSFKVASLNRKQKKKKNRLYQPVYLLHVPTMALSITQYIFSKGKLSACFSSSSGSAGVLQSPGV*

Sequence

>CNT30217689
TGAAGTCGAAAATGGCCTAATCTCATTACCAAGAAGCTTCAAGGTTGCTTCACTAAACAGAAAGCAGAAGAAGAAAAAAAATAGGCTTTACCAGCCAGTT
TACCTCCTCCATGTCCCAACTATGGCATTAAGCATTACACAATACATTTTTTCTAAAGGAAAGTTGTCTGCCTGCTTTTCATCATCATCAGGTTCTGCAG
GTGTTCTGCAGAGCCCTGGCGTATGAGAAGGACACGTGCCACGGGTTGGGCGACTGGTTCATCGCGTTGAGGTTCAGCGTCGCCTCCACCTCCGATTGCC