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Detailed information on CNT30217627


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LIS3|GAE6_ARATH, E-value = 6e-59

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524778Kalanchoe fedtschenkoiPhaseolus vulgaris20.2516.5680.92131forward
CNT30628592Kalanchoe fedtschenkoiVigna unguiculata31.0714.4581.09201forward
CNT30710616Kalanchoe fedtschenkoiGlycine max31.0715.0182.09201forward
CNT30570740Kalanchoe fedtschenkoiVitis vinifera21.0210.7583.09136forward

Expression of CNT30217627

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MRRRAMRRVARNKSLEEALSSLVLFTLLM*

>peptide 2 (70 aa)
RCKVQNVGEWNHVEQLPQQLVVVQIPFHDENLMLEQHGLAGSLQGGIVVGVEIVKPQNPITSFFESERAV*

>peptide 3 (38 aa)
MRGASVISDGRVVESKKENEEESNEEGSSKQELGRSVE*

>peptide 4 (31 aa)
AARCRTWVNGTTSNSFLSNLSSFRSPSTMKI*

Sequence

>CNT30217627
CGCTGCAAGGTGCAGAACGTGGGTGAATGGAACCACGTCGAACAGCTTCCTCAGCAACTTGTCGTCGTTCAGATCCCCTTCCACGATGAAAATCTGATGC
TTGAGCAGCATGGCCTGGCGGGATCTCTTCAAGGTGGGATCGTAGTAGGTGTTGAAATTGTCAAGCCCCAGAACCCCATCACCTCGTTTTTTGAGAGCGA
GCGAGCAGTGTGAGCCGACAAAGCCACCGGCGCCGGTGACGAGGACGGAGAATCCGTTGGGGCGTCGGGGAGTGGCGGAAGACAAGAAGTTGAAGTTGCT
GGTGGTGTGGAGATGCGGGGAGCTAGCGTGATCAGCGACGGGAGGGTAGTTGAGAGTAAAAAGGAGAATGAGGAGGAGAGCAATGAGGAGGGTAGCTCGA
AACAAGAGCTTGGAAGAAGCGTTGAGTAGCTTGGTGCTGTTCACTCTCCTTATGTAGCTATTGTACCTGTCGAGCTTGCTGGTGTCCGGGGGAGACGCCA
TTGATTGATGACAGACTGAAATCTGGCTACCTTTACTGGGTGGTGCTTAATTTCTTTAGCAGCAGCCTCAAACTATCCGGCCGGCAGCAGTGCGGCCAGG
TACACTGTGAGTGTGAGGTGTGGTCTGGGAGAGGAAGGGACTCGGAT