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Detailed information on CNT30217626


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30615599Kalanchoe fedtschenkoiSesamum indicum8.5821.8392.7355forward
CNT3019929Kalanchoe fedtschenkoiCitrullus lanatus18.126.7385.34116forward
CNT30598584Kalanchoe fedtschenkoiFraxinus excelsior19.0323.2483.61122forward

Expression of CNT30217626

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MYLILQIPKHIIIVYSFICIAQPNLFFFQVSNPFPLFEWK*

>peptide 2 (41 aa)
MCYRIFFLFDHFRKKILLFLLFYFIMRISPTTSDPWISTLEK

>peptide 3 (54 aa)
SQLKLILSTNQKGLLLDDVFDSPNTQTHHYCILFHMYRATQSLFFSSFESLPFV*

Sequence

>CNT30217626
TTCTCAACTAAAACTAATATTATCAACTAATCAGAAGGGTTTGTTATTGGACGATGTATTTGATTCTCCAAATACCCAAACACATCATTATTGTATACTC
TTTCATATGTATCGCGCAACCCAATCTCTTTTTTTTTCAAGTTTCGAATCCCTTCCCTTTGTTTGAATGGAAATAGTTAAATAATACGAAATTCACTCTT
GACAATGATATATCTTGTATATGTAAATCCTAGATATAAAAAATATGTGAAATTCAGCCACGAAAAGGTATAAAAAAAGAATAGGCGTAAATAGATAGGA
TCAAATAAGAAAATAAGAAATAAGGGCCAAAGAGATAGAAAAAAAAGGAATCATAAATAGAGTTCAGGTTCAAATTCCAAAGAGAATATCTATGGGATTA
TATGAATTAGTTGGCGTTATGGACTCATTGAATTAACAACGATTTAATCACTCGGATTCTGGTACCAATGAAATTGAGTGATAACTCCCATTTCTTATTG
AATTAATTGATCAATGTGCTATCGAATATTTTTTTTATTCGATCATTTTCGCAAAAAAATTCTCCTTTTTTTACTTTTTTATTTTATTATGAGAATTAGC
CCTACTACTTCTGATCCTTGGATTTCTACACTTGAAAAGAA