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Detailed information on CNT30217525


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532002Kalanchoe fedtschenkoiEucalyptus grandis99.3348.7491.131782forward
CNT30550233Kalanchoe fedtschenkoiIpomoea triloba98.1662.4791.371761forward
CNT30519036Kalanchoe fedtschenkoiJuglans regia98.9457.4191.771775forward
CNT30619307Kalanchoe fedtschenkoiSesamum indicum83.9589.9189.381506forward
CNT30283167Kalanchoe fedtschenkoiChenopodium quinoa98.5568.7191.861768forward
CNT30507933Kalanchoe fedtschenkoiNicotiana attenuata99.1187.4691.91778forward
CNT30711221Kalanchoe fedtschenkoiGlycine max76.2100.0792.761367forward
CNT30163337Kalanchoe fedtschenkoiPistacia vera76.8799.6490.431379forward
CNT30383013Kalanchoe fedtschenkoiTriticum turgidum84.557.1289.971516forward
CNT30311297Kalanchoe fedtschenkoiCamelina sativa97.4486.7989.931748forward
CNT3060563Kalanchoe fedtschenkoiArabidopsis lyrata97.0579.4690.921741reverse complement
CNT3075807Kalanchoe fedtschenkoiBrassica juncea98.2286.5890.31762forward
CNT30653443Kalanchoe fedtschenkoiRosa chinensis72.9799.4790.531309forward
CNT30355986Kalanchoe fedtschenkoiLactuca sativa91.9760.4487.71650forward
CNT30434045Kalanchoe fedtschenkoiPapaver somniferum99.2260.5990.511780forward
CNT30574469Kalanchoe fedtschenkoiVitis vinifera80.8879.1691.591451forward
CNT3023562Kalanchoe fedtschenkoiPopulus trichocarpa98.7779.3991.311772reverse complement
CNT30496898Kalanchoe fedtschenkoiDigitaria exilis82.8982.288.371487forward
CNT30176196Kalanchoe fedtschenkoiVigna angularis82.3398.2789.981477reverse complement

Expression of CNT30217525

Peptides detected in this lncRNA

>peptide 1 (30 aa)
NVAVDGNVRSGDVVGGLGKSYLFCLTACPP*

>peptide 2 (71 aa)
MRVPVAQLPTCSRDLPVPKGTCRRFSLRGRKAGRAALKYNFHRAAGRILCRRLKYATRYYKWKSGFAATIH*

>peptide 3 (36 aa)
MNGLTRFSLSLSTIQRNHSQGNDFGRISGKRRPCSA*

>peptide 4 (55 aa)
MPRHLISDAHEWINEILTVPVYYPAKPQPRERLWQNQRKKKTLFSLTLVRLCEMT*

>peptide 5 (98 aa)
MEQCTQGKSAKWICNLGKRIGSEGWARGSQPRTRRLSVDCSSCFRGESRSPRAGRGTDWEWLLRGRSPSVEQLAQNWYGQWESDCLIKTKHCNDPCGC*

>peptide 6 (71 aa)
MWNKRVKARLILISSTNTNRESVAYRSFRPSKFEARGVRKNATGITGLWQPSVHSDVAFDPSMSALPIIVK*

Sequence

>CNT30217525
AACGTGGCGGTTGACGGCAACGTTAGGTCCGGAGACGTCGTCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTAGAAACGAC
TCAGCCGGAGGTAGGGTCTAGCGGCTGAAAGAGCACCACAAGTCTTGTGGTGTCCGGTGCGCTCTTGGCGGCCCTTGAAAATCTGGAGGACCGAGTGCCG
ATCACGCCCGGTCGTACTAATAACCGCATCAGGTCTCCAAGGTGAACAACCTCTGATCGATGGAACAATGTACGCAAGGGAAATCGGCAAAATGGATCTG
TAACCTCGGGAAAAGGATTGGCTCTGAAGGCTGGGCCCGGGGGTCCCAGCCCCGAACCCGTCGGCTGTCAGTGGACTGCTCGAGCTGCTTCCGCGGCGAG
AGCAGATCGCCGCGTGCCGGCCGGGGGACGGATTGGGAATGGCTCCTCCGGGGGCGTTCCCCAAGCGTCGAACAGTTGGCTCAGAACTGGTATGGACAAT
GGGAATCCGACTGTTTAATTAAAACAAAGCATTGTAATGATCCCTGCGGATGTTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGA
AATTCAACCAAGCGCGGGTAAACGTCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAAC
GAGATTCTCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGACTTTGGCAGAATCAGCGGAAAAAGAAGACCCTGTTCAGCTTGACAC
TAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTGAAAGGCGTAAGTGAAATACCACTACTTTTAATATTATTTTACTTATTCCG
TGAAACGGAGGCGGGGCAACGCCCCTCTTTCTAGTTCCAAGGTCCGCTTCCGCGGGCCTATCCGGGCGGAAGACATTGTCAGATGGGGAGTTTGGCTGGG
GCGGCATATATGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCATGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTG
ATTTCTAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCGAAATTTGAAGCTAGAGGTGTCAGAAAAAATGCCACAGGGATAA
CTGGCTTGTGGCAGCCAAGCGTTCATAGCGATGTTGCTTTTGATCCTTCGATGTCGGCTCTTCCTATTATTGTGAAGTAGAATTCACGAAGTGTTGGATT
GTTCACCCACCAATAGGGAATGTGAGCTGGGTTTAGACCGTCGTGAAACAGGTTAGTTTTTCCTACTGATGACTGTGTTGTAATGGTAATTCAACCTAGT
ACGAGAGGAATCGTTGATTCGCACAATTAGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCAAAGCTACCATGCGCTGGATTATGACTGAAGGCCTCTAA
GTCAGAATCCGGGCCAGAGGCGATGCGTGTGCCCGTCGCCCAATTGCCGACCTGCAGTAGGGACCTTCCGGTCCCCAAAGGCACGTGTCGTAGGTTCAGC
TTGCGCGGCAGAAAAGCCGGGCGAGCCGCCTTGAAATACAATTTCCACCGAGCGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGAGGTATT
ATAAGTGGAAGAGTGGCTTTGCTGCCACGATCCACTGAGATTCAGCCCTATGTCGCTTCGATTCATCCCTCCCCCTCCTTCCTCCGAACATCAT