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Detailed information on CNT30217449


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH32|UBQ4_ARATH, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 5e-166

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641270Kalanchoe fedtschenkoiNymphaea colorata75.6857.1982.141142forward
CNT30274489Kalanchoe fedtschenkoiChenopodium quinoa60.374.3583.19910forward
CNT30526024Kalanchoe fedtschenkoiPhaseolus vulgaris60.1768.6385.13908forward
CNT30169886Kalanchoe fedtschenkoiPistacia vera75.4866.0783.491139forward
CNT30635990Kalanchoe fedtschenkoiCapsicum annuum75.9455.2883.251146forward
CNT3094992Kalanchoe fedtschenkoiSolanum tuberosum60.3778.2683.97911forward
CNT30226205Kalanchoe fedtschenkoiHordeum vulgare64.2893.9984.12970forward
CNT30568725Kalanchoe fedtschenkoiActinidia chinensis72.193.7982.351088forward
CNT30538027Kalanchoe fedtschenkoiBrassica napus76.0860.5581.881148forward
CNT30312399Kalanchoe fedtschenkoiCamelina sativa75.4887.2182.441139forward
CNT3061767Kalanchoe fedtschenkoiArabidopsis lyrata58.5254.0784.82883forward
CNT3073617Kalanchoe fedtschenkoiBrassica juncea75.6833.8182.661142forward
CNT30264722Kalanchoe fedtschenkoiBrassica rapa60.3786.1183.97911forward
CNT30460578Kalanchoe fedtschenkoiSaccharum spontaneum70.3853.0782.391062forward
CNT30141881Kalanchoe fedtschenkoiLolium perenne75.6177.1585.011141forward
CNT307928Kalanchoe fedtschenkoiZea mays59.9175.8484.4904forward
CNT30229013Kalanchoe fedtschenkoiAnanas comosus73.8270.6484.381114forward
CNT3066849Kalanchoe fedtschenkoiLeersia perrieri75.7585.5581.891143forward
CNT30652285Kalanchoe fedtschenkoiRosa chinensis60.3774.8685.29911forward
CNT30716337Kalanchoe fedtschenkoiMalus domestica golden70.7886.284.271068forward
CNT30623044Kalanchoe fedtschenkoiDaucus carota75.6857.9183.361142forward
CNT30689805Kalanchoe fedtschenkoiTriticum urartu75.6183.3585.451141forward
CNT30480747Kalanchoe fedtschenkoiArabidopsis halleri58.3875.9585.47881forward
CNT30704854Kalanchoe fedtschenkoiPrunus avium75.4863.8885.071139forward
CNT30642514Kalanchoe fedtschenkoiCannabis sativa58.7880.283.99887forward
CNT3026527Kalanchoe fedtschenkoiPopulus trichocarpa56.286.884.32848forward
CNT30324534Kalanchoe fedtschenkoiAsparagus officinalis68.9981.3982.81041forward
CNT30111644Kalanchoe fedtschenkoiFicus carica75.4879.9382.621139forward
CNT30334105Kalanchoe fedtschenkoiCynara cardunculus73.5647.0781.981110forward
CNT3050995Kalanchoe fedtschenkoiCucumis sativus71.2496.5984.281075forward

Expression of CNT30217449

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSEDSTSRVMVLPVKVLTKICIPPRRRRTKWRVDSFWIL*

>peptide 2 (49 aa)
MKSRLLLDVVVGQSAAVLELLAREDQPLLVRRNSFLVLNLSLHVVDRVG*

>peptide 3 (37 aa)
MVSELSTSRVMVFPVRVFTKICMPPRRRRTRWRVDSF*

Sequence

>CNT30217449
GCCCTTCTTTCACTAGGCAGGCACGACACAGACTGACACAAAGAGCAGAGTAGAGTTTAAACTGAAACTGAAGACGAGCACACAGATATAGCAGACCAAA
TTCAATCCCAAGACAAAAGCAACCAACATCATGACATTCAGTTTCCACCACGCAGACGCAGGACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTC
AGCCAGAGTCCTCCCATCTTCCAACTGCTTGCCCGCAAAAATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCCTGGATCTTTGCCTTGACATTG
TCAATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTCACAAAGATCTGCATGCCACCCCGCAGACGGAGGACCAGGTGGA
GGGTGGATTCCTTCTGAATGTTGTAGTCAGCGAGAGTGCGTCCATCCTCAAGTTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGCGGGATTCCCTC
CTTATCCTGGATCTTAGCTTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATCTGCATA
CCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATATTGTAATCAGCAAGAGTACGTCCATCCTCCAACTGCTTACCGGCGAAGATAA
GCCTCTGCTGGTCAGGCGGAATTCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTATCAATTGTGTCAGAGCTCTCAACCTCCAAAGTGATGGTCTTGCC
CGTCAGAGTCTTCACAAAGATCTGCATACCACCACGGAGACGCAGAACCAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCG
TCCTCGAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGAATCTTAGCCTTGACGTTGTCGATTGTGTCGGAGC
TCTCAACCTCGAGGGTGATGGTCTTACCGGTCAAAGTCTTCACGAAGATCTGCATGCCTCCCCTCAATCGGAGCACCAGATGAAGAGTCGACTCCTTCTG
GATGTTGTAGTCGGCCAAAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGCCTCTGCTGGTCCGGAGGAATTCCTTCCTTGTCCTGAATCTTA
GCCTTCACGTTGTCGATCGTGTCGGATGACTCGACCTCGAGCGTGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCATCTGCAAATCACAAATCC
GGTCATAAAAATTCGAATCCAACCACAAATCAACAGATCTGAACAATCGGATAACTGATCAGAGACAAACGATTCAATTCAACGGAGCAAAGACTAGGCG
ACTCAAATCCGGTCAATCGCATACCGATAAGTTCGAAATCCGACCTCCAGAGGAAATCGACGACGCTAATCAACAACAACAACTGAAAGAAGGAAGAAAA
AACTGAGAG