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Detailed information on CNT30217432


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-158

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-109

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315749Kalanchoe fedtschenkoiCorylus avellana68.8842.2485.57686forward
CNT30546134Kalanchoe fedtschenkoiIpomoea triloba65.8680.9985.06656forward
CNT30586586Kalanchoe fedtschenkoiMusa acuminata60.8442.6286.47606forward
CNT30230519Kalanchoe fedtschenkoiAnanas comosus67.0767.2785.63668forward

Expression of CNT30217432

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVMVFPVRVFTKICMPPRRRRTR*

>peptide 2 (49 aa)
MKSRLLLDVVVGQSAAVLELLAREDQPLLVRRNSFLVLNLSLHVVDRVG*

Sequence

>CNT30217432
TTTAAACTGAAACTGAAGACGAGCACACAGATATAGCAGACCAAATTCAATCCCAAGACAAAAGCAACCAACATCATGACATTCAGTTTCCACCACGCAG
ACGCAGGACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTCCTCCCATCTTCCAACTGCTTGCCCGCAAAAATCAACCTCTGCTGG
TCCGGTGGGATCCCCTCCTTGTCCTGGATCTTTGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCT
TCACAAAGATCTGCATGCCACCCCGCAGACGGAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCTGCCAAGGTGCGGCCGTCCTCGAGCTG
CTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGAATCTTAGCCTTGACGTTGTCGATTGTGTCGGAGCTCTCAACCTCG
AGGGTGATGGTCTTACCGGTCAAAGTCTTCACGAAGATCTGCATGCCTCCCCTCAATCGGAGCACCAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGT
CGGCCAAAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGCCTCTGCTGGTCCGGAGGAATTCCTTCCTTGTCCTGAATCTTAGCCTTCACGTT
GTCGATCGTGTCGGATGACTCGACCTCGAGCGTGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCATCTGCAAATCACAAATCCGGTCATAAAAA
TTCGAATCCAACCACAAATCAACAGATCTGAACAATCGGATAACTGATCAGAGACAAACGATTCAATTCAACGGAGCAAAGACTAGGCGACTCAAATCCG
GTCAATCGCATACCGATAAGTTCGAAATCCGACCTCCAGAGGAAATCGACGACGCTAATCAACAACAACAACTGAAAGAAGGAAGAAAAAACTGAG