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Detailed information on CNT30217431


BLAST search results

BLAST vs Swiss-Prot:
sp|Q1EC66|UBQ3_ARATH, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 9e-143

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641251Kalanchoe fedtschenkoiNymphaea colorata67.551.6783.59914forward
CNT30528288Kalanchoe fedtschenkoiEucalyptus grandis67.5868.2886.01915forward
CNT30546269Kalanchoe fedtschenkoiIpomoea triloba60.7891.6584.08823forward
CNT30513419Kalanchoe fedtschenkoiJuglans regia48.6776.9987.25659forward
CNT30727322Kalanchoe fedtschenkoiCorchorus capsularis67.4371.8383.68913forward
CNT30630785Kalanchoe fedtschenkoiVigna unguiculata50.1579.686.3679forward
CNT30710308Kalanchoe fedtschenkoiGlycine max50.2273.5986.47680forward
CNT3044330Kalanchoe fedtschenkoiPrunus dulcis66.9174.0885.43906forward
CNT30169898Kalanchoe fedtschenkoiPistacia vera67.2851.7385.18911forward
CNT3095105Kalanchoe fedtschenkoiSolanum tuberosum67.2178.3183.74910forward
CNT3089455Kalanchoe fedtschenkoiVigna radiata65.2172.6285.62883forward
CNT30238962Kalanchoe fedtschenkoiBrassica oleracea67.9547.5983.04920forward
CNT30171101Kalanchoe fedtschenkoiTrifolium pratense67.6555.0883.3916forward
CNT30312659Kalanchoe fedtschenkoiCamelina sativa67.546.4284.03914forward
CNT3077383Kalanchoe fedtschenkoiBrassica juncea67.570.5283.81914forward
CNT30359535Kalanchoe fedtschenkoiLactuca sativa68.0954.5982.97922forward
CNT30643414Kalanchoe fedtschenkoiCannabis sativa65.0783.7583.2881forward
CNT3032244Kalanchoe fedtschenkoiTheobroma cacao67.4379.4684.12913forward
CNT30321313Kalanchoe fedtschenkoiAsparagus officinalis62.8564.9184.14851forward
CNT30120688Kalanchoe fedtschenkoiCitrus clementina65.3681.0483.05885forward
CNT30174705Kalanchoe fedtschenkoiVigna angularis67.4359.0285.32913forward
CNT30114931Kalanchoe fedtschenkoiEutrema salsugineum67.1381.9783.83909forward

Expression of CNT30217431

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVMVFPVRVLTKICIPPRRRRTKWRVDSFWIL*

>peptide 2 (49 aa)
MKSRLLLDVVVGQSAAVLELLAREDQPLLVRRNSFLVLNLSLHVVDRVG*

Sequence

>CNT30217431
TTCTGAAGTAGGTACTTTTATTGGATAGAGAAGCCTCCCTAGTATAGAGTTGGCATATAGAGAGCCCTTCTTTCACTAGGCAGGCACGACACAGACTGAC
ACAAAGAGCAGAGTAGAGTTTAAACTGAAACTGAAGACGAGCACACAGATATAGCAGACCAAATTCAATCCCAAGACAAAAGCAACCAACATCATGACAT
TCAGTTTCCACCACGCAGACGCAGGACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTCCTCCCATCTTCCAACTGCTTGCCCGCA
AAAATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCCTGGATCTTTGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGG
TCTTTCCAGTGAGGGTCTTGACAAAGATCTGCATACCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATATTGTAATCAGCAAGAGT
ACGTCCATCCTCCAACTGCTTACCGGCGAAGATAAGCCTCTGCTGGTCAGGCGGAATTCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTATCAATTGTG
TCAGAGCTCTCAACCTCCAAAGTGATGGTCTTGCCCGTCAGAGTCTTCACAAAGATCTGCATACCACCACGGAGACGCAGAACCAGGTGAAGGGTTGACT
CCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG
AATCTTAGCCTTGACGTTGTCGATTGTGTCGGAGCTCTCAACCTCGAGGGTGATGGTCTTACCGGTCAAAGTCTTCACGAAGATCTGCATGCCTCCCCTC
AATCGGAGCACCAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGCCTCTGCT
GGTCCGGAGGAATTCCTTCCTTGTCCTGAATCTTAGCCTTCACGTTGTCGATCGTGTCGGATGACTCGACCTCGAGCGTGATGGTCTTTCCGGTGAGAGT
CTTGACGAAGATCTGCATCTGCAAATCACAAATCCGGTCATAAAAATTCGAATCCAACCACAAATCAACAGATCTGAACAATCGGATAACTGATCAGAGA
CAAACGATTCAATTCAACGGAGCAAAGACTAGGCGACTCAAATCCGGTCAATCGCATACCGATAAGTTCGAAATCCGACCTCCAGAGGAAATCGACGACG
CTAATCAACAACAACAACTGAAAGAAGGAAGAAAAAACTGAGAGAATCGCATAC