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Detailed information on CNT30217112


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39654|PSAL_CUCSA, E-value = 1e-59

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516757Kalanchoe fedtschenkoiJuglans regia10.9521.2181.9105forward
CNT30507460Kalanchoe fedtschenkoiNicotiana attenuata11.0534.9883.96106forward
CNT30709939Kalanchoe fedtschenkoiGlycine max11.9934.8581.74115forward
CNT3042792Kalanchoe fedtschenkoiPrunus dulcis10.8428.1883.65104forward
CNT3094368Kalanchoe fedtschenkoiSolanum tuberosum11.6843.2486.61112forward
CNT3037642Kalanchoe fedtschenkoiCucumis melo9.5934.7288.0492forward

Expression of CNT30217112

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MALTVKVETLLQGRALNEEPERPLGAAARILLTVKELVS*

>peptide 2 (44 aa)
MLRMATSPPAANDPAGKLERYHAINGLEVTGVSRLPMKGSPLIG*

>peptide 3 (50 aa)
MTPEIPPKKNPPVNFSQPSAVWSGSGVFFLPVRVKPGAVDGSPSLKDEIP*

>peptide 4 (29 aa)
RVIDKKCWKLQAVIHIQAHHIPTDKLYLT*

>peptide 5 (36 aa)
MFTIALVIISALKISNLNLKLNFNCRDSKPFRFGWL*

Sequence

>CNT30217112
CAAGGGTAATAGATAAGAAGTGTTGGAAATTACAAGCAGTCATCCATATACAAGCACACCATATCCCAACTGACAAGCTCTACTTGACGTAGTAAGGAAG
GTTAAGGCCGTATAGAAGGAAGTAAGCCCAAATGACTCCAGAGATTCCTCCAAAGAAAAACCCTCCGGTGAACTTTTCCCAGCCCTCTGCAGTCTGGAGC
GGATCCGGGGTCTTCTTCCTCCCGGTCAGAGTCAAACCCGGAGCAGTTGACGGCTCCCCTTCCTTGAAGGATGAAATTCCGTAGATTGTCAAGCAAATGC
TGAGAATGGCCACAAGCCCTCCTGCAGCCAATGATCCTGCGGGCAAGTTGGAGAGGTACCATGCTATCAATGGACTTGAGGTCACCGGTGTCTCCAGACT
TCCAATGAAGGGGTCTCCATTGATTGGTTGAACCACTTGGTAAGTCGGCTGCAAACAAAACAATCACTATCCTGGTCACAGCTATTCAATCCGAAATTCA
CCCATAGGAACTGAACAAATGAATACATTCAAACTCTAGTGACATGTATGACATGAGAGCCCCCAAAGATTCTGAACCAAGCCACAGATGATCTAGTTGT
GTTAGACATAGATCAGTTCAAGGATGTTCACCATTGCCCTTGTTATCATCTCAGCCTTAAAAATTTCTAATCTCAATCTAAAGTTGAACTTTAACTGCAG
AGATAGCAAACCTTTTCGCTTTGGATGGCTTTGACAGTGAAAGTAGAGACCCTTCTGCAAGGAAGGGCCTTGAATGAGGAGCCAGAGAGGCCCCTGGGAG
CAGCAGCAAGGATTCTGTTGACAGTGAAGGAGCTCGTGAGCTGACTGGCCATTGGAGAGGCTGAAGCCATTGATCCTCTCTATTCTCTGTACCAGCTGAG
TTGTTCGGTGTTTGTGATTTTTAGAAGTGTAATAAGAACAGAGGAGGAGATAATAGCAC