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Detailed information on CNT30216752


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 4e-25

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523536Kalanchoe fedtschenkoiSetaria italica36.0729.5682.63167forward
CNT30640872Kalanchoe fedtschenkoiNymphaea colorata41.2525.2384.29191forward
CNT30536042Kalanchoe fedtschenkoiEucalyptus grandis37.5831.6482.76174forward
CNT30700558Kalanchoe fedtschenkoiQuercus lobata21.1736.385.7198forward
CNT30378908Kalanchoe fedtschenkoiManihot esculenta37.818.5482.86175forward
CNT30403782Kalanchoe fedtschenkoiBeta vulgaris40.1744.582.26186forward
CNT30628702Kalanchoe fedtschenkoiVigna unguiculata28.9419.5684.33134forward
CNT30489068Kalanchoe fedtschenkoiOlea europaea66.5262.3580.84308forward
CNT30506121Kalanchoe fedtschenkoiNicotiana attenuata33.4837.4484.52155forward
CNT30710435Kalanchoe fedtschenkoiGlycine max65.8752.8680.66305forward
CNT3091337Kalanchoe fedtschenkoiSolanum tuberosum62.4235.4281.66289forward
CNT30559586Kalanchoe fedtschenkoiActinidia chinensis39.9622.9282.7185forward
CNT30591824Kalanchoe fedtschenkoiMusa acuminata46.8754.9480.18217forward
CNT30508722Kalanchoe fedtschenkoiSolanum lycopersicum54.8649.5181.89254forward
CNT30605857Kalanchoe fedtschenkoiGossypium raimondii42.5524.2983.25197forward
CNT30648676Kalanchoe fedtschenkoiRosa chinensis45.7928.4682.55212forward
CNT30355218Kalanchoe fedtschenkoiLactuca sativa54.8637.4182.68254forward
CNT30642027Kalanchoe fedtschenkoiCannabis sativa36.0726.1885.63167forward
CNT3051605Kalanchoe fedtschenkoiAmborella trichopoda44.4931.0781.55206forward
CNT30121049Kalanchoe fedtschenkoiCitrus clementina43.8418.7684.24203forward
CNT3035221Kalanchoe fedtschenkoiCucumis melo40.649.2182.98188forward
CNT30330871Kalanchoe fedtschenkoiDioscorea rotundata30.2419.3685.71140forward
CNT30335476Kalanchoe fedtschenkoiCynara cardunculus50.3219.1881.97233forward

Expression of CNT30216752

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MQAMWGCKKAMWGCRKATWGCRTERWDCRQGRWGCSWERSGYNLAM*

Sequence

>CNT30216752
CTGTAATTAGGTGAAGTTGGACTGTATGAACCAGGTGACATTCTTGGACTGCTGGGTGAGTATGCCTGCGACGGGCTGTACTTAGCAGATGAAGGATTAT
AACTAGGGGATGTAGGACTGTAACTTGGGGAGGTAGGACTGTATCCCGGAGAAGTAGGACTGTATGCAGGCGATGTGGGGCTGTAAGAAGGCGATGTGGG
GCTGTAGGAAGGCGACGTGGGGCTGTAGGACGGAGAGGTGGGACTGTAGGCAGGGGAGGTGGGGCTGTAGCTGGGAGAGGTCGGGCTATAACTTGGCGAT
GTAGGGCTATAACTTGGTGAGGTGGGGGAATAAGAGGGACTAGTAGGCGAATAGGCCGGACTGGTTGGGCTATAACCAGGAGAGCTGGGGCTGTAGGTTG
GAGAGGTAGGGCTGTATCCAGGTGATGTAGGACTGTATCCAGGTGATGTGGGGCTGTAGCCTG