Detailed information on CNT3021668


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619421Citrullus lanatusSesamum indicum38.1973.8695.38975forward
CNT30730436Citrullus lanatusCorchorus capsularis55.27100.2194.91411forward

Expression of CNT3021668

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MCPSRMWNGDEPVRRSTWGMDRCGLRRRPTPRPLLRLWRRRRPDRGWQRAPPGGLRHLRAPGIGLWAPHSTRLETRTKESDMCAS*

>peptide 2 (85 aa)
MCPSRMWNGDEPVRRSTWGMDRCGLRRRPTPRPLLRLWRRRRPDRGWQRAPPGGLRHLRAPGIGLWAPHSTRLETRTKESDMCAS*

>peptide 3 (40 aa)
MQPQSGGKFCPRLNMGERPIANKYREGKMKRTLKRESNSA*

>peptide 4 (40 aa)
MQPQSGGKFCPRLNMGERPIANKYREGKMKRTLKRESNSA*

>peptide 5 (51 aa)
MRIETAAYAQAFVTPVETSSSRSWLAARASGRASASARSWHRPVGSPFDPS*

>peptide 6 (51 aa)
MRIETAAYAQAFVTPVETSSSRSWLAARASGRASASARSWHRPVGSPFDPS*

>peptide 7 (37 aa)
PQVRRDYPLSLSISISGGKETYKDSPSNGERTGKSPA*

Sequence

>CNT3021668
CCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGA
AGAGCCCAGCTTGAAAATCGGGCGTCCTCGACGTCCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCACAAGTCCCCTGGAAGGGGGCGC
CGGAGAGGGTGAGAGCCCCGTTGCGCTCGGACCCTGTCGCACCACGAGGCGCTGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAA
ATTCTGTCCAAGGCTAAATATGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAATAGTGCTTGA
AATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGTGCCCCAGTCGGATGTGGAACGGTGACGAGCCGGTCCGCCGATCGACTTGGGGCATGGACCGAT
GCGGATTGAGACGGCGGCCTACGCCCAGGCCTTTGTTACGCCTGTGGAGACGTCGTCGTCCCGATCGTGGCTGGCAGCGCGCGCCTCCGGGCGGGCTTCG
GCATCTGCGCGCTCCTGGCATCGGCCTGTGGGCTCCCCATTCGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTTAACGGGCGAGT
AAACCCGTAAGGCGCAAGGAAGCTGACTGGTGGGATCCCCTAGTGGGTTGCACCACCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGC
CTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGT
CTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCAGGCGGGACTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGG
ATTCCCCTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAAAATCGGGCGTCCTCGACGTCCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGG
ACCGGGCACAAGTCCCCTGGAAGGGGGCGCCGGAGAGGGTGAGAGCCCCGTTGCGCTCGGACCCTGTCGCACCACGAGGCGCTGTCAACGAGTCGGGTTG
TTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCTGTCCAAGGCTAAATATGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGG
ACTTTGAAAAGAGAGTCAAATAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGTGCCCCAGTCGGATGTGGAACGGTGACGAGCCGG
TCCGCCGATCGACTTGGGGCATGGACCGATGCGGATTGAGACGGCGGCCTACGCCCAGGCCTTTGTTACGCCTGTGGAGACGTCGTCGTCCCGATCGTGG
CTGGCAGCGCGCGCCTCCGGGCGGGCTTCGGCATCTGCGCGCTCCTGGCATCGGCCTGTGGGCTCCCCATTCGACCCGTCTTGAAACACGGACCAAGGAG
TCTGACATGTGTGCGAGTTAACGGGCGAGTAAACCCGTAAGGCGCAAGGAAGCTGACTGGTGGGATCCCCTAGTGGGTTGCACCACCGACCGACCTTGAT
CTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCC
CGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCA
GGATAGCTGGAGCCCGCGGGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGT
AGGACGGCGCGGCTGCTTTGTTGAGCCGCGCCACGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAG
CCGGGTTACGGTGCCTAACTGCGCGCTAACCTAGATCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAA
GGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCTATACCCGGCCGTCGGGGCAAGAGCCAAGCCC
CGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTTGGGCGTGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAA
ATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGGGAAACCCGTCTGATAGC
GCGACAGCGCGAACTTCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACG