Detailed information on CNT3021662


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730396Citrullus lanatusCorchorus capsularis39.36100.3195.51600forward
CNT3072442Citrullus lanatusQuercus suber42.6899.9492.621735forward
CNT30234560Citrullus lanatusBrassica oleracea41.8589.293.421701reverse complement
CNT30312195Citrullus lanatusCamelina sativa42.1268.6493.931712reverse complement
CNT30262535Citrullus lanatusBrassica rapa57.6999.5394.292345reverse complement
CNT30355977Citrullus lanatusLactuca sativa37.6487.3894.771530forward

Expression of CNT3021662

Peptides detected in this lncRNA

>peptide 1 (98 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGSQSRTRRLSVDCSSCSRGESGSPRAGRGTDWERLLRGPSPGVEQSTQNWYGQGESDCLIKTKHCDGPCGC*

>peptide 2 (85 aa)
MCPSRMWNGDEPVRRSTWGMDRCGLRRRPTPRPLLRLWRRRRPDRGWQRAPPGGLRHLRAPGIGLWAPHSTRLETRTKESDMCAS*

>peptide 3 (85 aa)
MCPSRMWNGDEPVRRSTWGMDRCGLRRRPTPRPLLRLWRRRRPDRGWQRAPPGGLRHLRAPGIGLWAPHSTRLETRTKESDMCAS*

>peptide 4 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 5 (51 aa)
MRIETAAYAQAFVTPVETSSSRSWLAARASGRASASARSWHRPVGSPFDPS*

>peptide 6 (51 aa)
MRIETAAYAQAFVTPVETSSSRSWLAARASGRASASARSWHRPVGSPFDPS*

>peptide 7 (40 aa)
MQPQSGGKFCPRLNMGERPIANKYREGKMKRTLKRESNSA*

>peptide 8 (40 aa)
MQPQSGGKFCPRLNMGERPIANKYREGKMKRTLKRESNSA*

>peptide 9 (37 aa)
PQVRRDYPLSLSISISGGKETYKDSPSNGERTGKSPA*

>peptide 10 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

Sequence

>CNT3021662
CCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGA
AGAGCCCAGCTTGAAAATCGGGCGTCCTCGACGTCCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCACAAGTCCCCTGGAAGGGGGCGC
CGGAGAGGGTGAGAGCCCCGTTGCGCTCGGACCCTGTCGCACCACGAGGCGCTGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAA
ATTCTGTCCAAGGCTAAATATGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAATAGTGCTTGA
AATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGTGCCCCAGTCGGATGTGGAACGGTGACGAGCCGGTCCGCCGATCGACTTGGGGCATGGACCGAT
GCGGATTGAGACGGCGGCCTACGCCCAGGCCTTTGTTACGCCTGTGGAGACGTCGTCGTCCCGATCGTGGCTGGCAGCGCGCGCCTCCGGGCGGGCTTCG
GCATCTGCGCGCTCCTGGCATCGGCCTGTGGGCTCCCCATTCGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTTAACGGGCGAGT
AAACCCGTAAGGCGCAAGGAAGCTGACTGGTGGGATCCCCTAGTGGGTTGCACCACCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGC
CTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGT
CTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCCCGCGGGCGAGTTCTAT
CGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGCG
CCACGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCTAACTGCGCGCTAAC
CTAGATCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCA
ACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCTATACCCGGCCGTCGGGGCAAGAGCCAAGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGC
AAAACCTTGGGCGTGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAA
GGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGGGAAACCCGTCTGATAGCGCGACAGCGCGAACTTCGAAAGGGAATCGG
GTTAAAATTCCTGAACCGGGACGTGGCGGCTGACGGCAACGTTAGGGATTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACA
GCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGTGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGA
AAATCCGGAGGACCGAGTGCCTCCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAG
GGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTG
CTCGAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGCTCCTTCGGGGGCCTTCCCCGGGCGTCGAACAGTCA
ACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGCTAACGCAATGTGATTTCTGCCCAGT
GCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAG
TGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAG
AAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGCGGGACTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAG
AAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAAAATCGGGCGTCCTCGACGTCCGAATTGTAGTCTGGAGAAGCGT
CCTCAGCGGCGGACCGGGCACAAGTCCCCTGGAAGGGGGCGCCGGAGAGGGTGAGAGCCCCGTTGCGCTCGGACCCTGTCGCACCACGAGGCGCTGTCAA
CGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCTGTCCAAGGCTAAATATGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGA
AAGATGAAAAGGACTTTGAAAAGAGAGTCAAATAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGTGCCCCAGTCGGATGTGGAACG
GTGACGAGCCGGTCCGCCGATCGACTTGGGGCATGGACCGATGCGGATTGAGACGGCGGCCTACGCCCAGGCCTTTGTTACGCCTGTGGAGACGTCGTCG
TCCCGATCGTGGCTGGCAGCGCGCGCCTCCGGGCGGGCTTCGGCATCTGCGCGCTCCTGGCATCGGCCTGTGGGCTCCCCATTCGACCCGTCTTGAAACA
CGGACCAAGGAGTCTGACATGTGTGCGAGTTAACGGGCGAGTAAACCCGTAAGGCGCAAGGAAGCTGACTGGTGGGATCCCCTAGTGGGTTGCACCACCG
ACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACT
CTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCG
AAGTTTCCCTCAGGATAGCTGGAGCCCGCGGGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAA
CTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGCGCCACGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGG
ATGAACCGGAAGCCGGGTTACGGTGCCTAACTGCGCGCTAACCTAGATCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTC
GAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCTATACCCGGCCGTCGGGGCA
AGAGCCAAGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTTGGGCGTGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTA
GCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGGGAAAC
CCGTCTGATAGCGCGACAGCGCGAACTTCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACG