Detailed information on CNT3021659


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30711135Citrullus lanatusGlycine max63.3684.8695.662696forward
CNT30544747Citrullus lanatusBrassica napus59.3298.5694.142524reverse complement
CNT30434075Citrullus lanatusPapaver somniferum62.0798.493.752641forward

Expression of CNT3021659

Peptides detected in this lncRNA

>peptide 1 (32 aa)
DDALDATPGQAGLPAEFKHINKRRKRNLQGFP*

>peptide 2 (44 aa)
RMTLSTRPQVRRDYPLSLSISISGGKETYKDSPSNGERTGKSPA*

>peptide 3 (40 aa)
MQPQSGGKFCPRLNMGERPIANKYREGKMKRTLKRESNSA*

>peptide 4 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 5 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 6 (51 aa)
MRIETAAYAQAFVTPVETSSSRSWLAARASGRASASARSWHRPVGSPFDPS*

>peptide 7 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 8 (85 aa)
MCPSRMWNGDEPVRRSTWGMDRCGLRRRPTPRPLLRLWRRRRPDRGWQRAPPGGLRHLRAPGIGLWAPHSTRLETRTKESDMCAS*

>peptide 9 (98 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGSQSRTRRLSVDCSSCSRGESGSPRAGRGTDWERLLRGPSPGVEQSTQNWYGQGESDCLIKTKHCDGPCGC*

>peptide 10 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 11 (68 aa)
MSSTRTEISCGTKGVKARLILISSTNTNRESVAYRSFRPSEFEARGVRKVTTGITGLWQPSVHSDVAF*

>peptide 12 (98 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGSQSRTRRLSVDCSSCSRGESGSPRAGRGTDWERLLRGPSPGVEQSTQNWYGQGESDCLIKTKHCDGPCGC*

Sequence

>CNT3021659
AGGATGACGCTCTCGACGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTA
GTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAAAATCGGGCGTCCTCGACGTCCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCAC
AAGTCCCCTGGAAGGGGGCGCCGGAGAGGGTGAGAGCCCCGTTGCGCTCGGACCCTGTCGCACCACGAGGCGCTGTCAACGAGTCGGGTTGTTTGGGAAT
GCAGCCCCAATCGGGCGGTAAATTCTGTCCAAGGCTAAATATGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAA
AGAGAGTCAAATAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGTGCCCCAGTCGGATGTGGAACGGTGACGAGCCGGTCCGCCGAT
CGACTTGGGGCATGGACCGATGCGGATTGAGACGGCGGCCTACGCCCAGGCCTTTGTTACGCCTGTGGAGACGTCGTCGTCCCGATCGTGGCTGGCAGCG
CGCGCCTCCGGGCGGGCTTCGGCATCTGCGCGCTCCTGGCATCGGCCTGTGGGCTCCCCATTCGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATG
TGTGCGAGTTAACGGGCGAGTAAACCCGTAAGGCGCAAGGAAGCTGACTGGTGGGATCCCCTAGTGGGTTGCACCACCGACCGACCTTGATCTTCTGAGA
AGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGAT
ACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTG
GAGCCCGCGGGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCG
CGGCTGCTTTGTTGAGCCGCGCCACGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTAC
GGTGCCTAACTGCGCGCTAACCTAGATCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGT
AACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCTATACCCGGCCGTCGGGGCAAGAGCCAAGCCCCGATGAGTA
GGAGGGCGCGGCGGTCGCTGCAAAACCTTGGGCGTGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACT
TTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGGGAAACCCGTCTGATAGCGCGACAGCG
CGAACTTCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGCTGACGGCAACGTTAGGGATTCCGGAGACGTCGGCGGGGGCCTCGGGAAG
AGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGTGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGG
TGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCTCCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGT
CGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAAC
CCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGCTCCTTCGGGGGCCT
TCCCCGGGCGTCGAACAGTCAACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGCTAAC
GCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCA
AATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCT
TGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGAAAGGCG
AAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAAACGGAAGCGGGGCACTGCCCCTCTTTTTGGACATAAGGCTTGCTTCGGCGGGC
CGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAG
AAATCTCGTGTGGAACAAAAGGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATT
GGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCG
GCCGGGGGACGGACTGGGAACGGCTCCTTCGGGGGCCTTCCCCGGGCGTCGAACAGTCAACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAAT
TAAAACAAAGCATTGCGATGGTCCCTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGT
AAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTG
TCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAAT
GACTTGAGAGGTGTAGGATAAGTGGGAGCCGAAAGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAAACGGAAGCGGGGCAC
TGCCCCTCTTTTTGGACATAAGGCTTGCTTCGGCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAG
ATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACG
AACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAA
GCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGG
GAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTG
ATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA
GAAGCGACGCATGCGCCCATCGCTCGATTGCCGACCAGCAGTAGGGGCCTTCCGGCCCCCAAAGGCACGTGTCGTTGGCTAAGCCCTCGTGACGGATGAG
TTGCGGGGGCCGCCTTGAAACGTAATTCCCACCGAGCGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACAGGGTATTGTAAGTGGCAGAGTGG
CCTTGCTGCCACGATCCACTGAGATTCAGCCCTTCGTCGCTCCGATTCGTCCCTC