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Detailed information on CNT3021657


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519243Citrullus lanatusJuglans regia62.86896.3920forward
CNT3091928Citrullus lanatusSolanum tuberosum52.3599.3595.57767reverse complement
CNT3036642Citrullus lanatusCucumis melo61.84100.5598.23906forward

Expression of CNT3021657

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MQPQSGGESEIPLLLTLFYLFRETEAGHCPSFWT*

>peptide 2 (44 aa)
RMTLSTRPQVRRDYPLSLSISISGGKETYKDSPSNGERTGKSPA*

>peptide 3 (32 aa)
DDALDATPGQAGLPAEFKHINKRRKRNLQGFP*

Sequence

>CNT3021657
AGGATGACGCTCTCGACGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTA
GTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAAAATCGGGCGTCCTCGACGTCCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCAC
AAGTCCCCTGGAAGGGGGCGCCGGAGAGGGTGAGAGCCCCGTTGCGCTCGGACCCTGTCAGGCGGGACTACCCGCTGAGTTTAAGCATATCAATAAGCGG
AGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAAAATCGGGCGTCCTCGACGTCCGAATTGTAGTCTGG
AGAAGCGTCCTCAGCGGCGGACCGGGCACAAGTCCCCTGGAAGGGGGCGCCGGAGAGGGTGAGAGCCCCGTTGCGCTCGGACCCTGTCGCACCACGAGGC
GCTGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAAACGG
AAGCGGGGCACTGCCCCTCTTTTTGGACATAAGGCTTGCTTCGGCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACA
TCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAG
TACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTG
TGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACC
CACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGA
GGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGA
ATCCGGGCTAGAAGCGACGCATGCGCCCATCGCTCGATTGCCGACCAGCAGTAGGGGCCTTCCGGCCCCCAAAGGCACGTGTCGTTGGCTAAGCCCTCGT
GACGGATGAGTTGCGGGGGCCGCCTTGAAACGTAATTCCCACCGAGCGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACAGGGTATTGTAAGT
GGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTTCGTCGCTCCGATTCGTCCCTC