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Detailed information on CNT30216563


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 8e-14

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670969Kalanchoe fedtschenkoiSetaria viridis26.1289.0498.921016reverse complement
CNT30641383Kalanchoe fedtschenkoiNymphaea colorata35.1243.7395.021366forward
CNT30550219Kalanchoe fedtschenkoiIpomoea triloba50.0144.893.731945forward
CNT30702366Kalanchoe fedtschenkoiQuercus lobata25.6110099.2996reverse complement
CNT30490123Kalanchoe fedtschenkoiOlea europaea37.7284.2693.461467forward
CNT30505428Kalanchoe fedtschenkoiNicotiana attenuata48.626293.441891forward
CNT30185187Kalanchoe fedtschenkoiSecale cereale35.2538.7697.811371forward
CNT30299053Kalanchoe fedtschenkoiTriticum aestivum35.2538.2697.451371forward
CNT30221833Kalanchoe fedtschenkoiHordeum vulgare23.7167.5597.07922forward
CNT30394721Kalanchoe fedtschenkoiTriticum turgidum35.2537.4397.741371forward
CNT30569654Kalanchoe fedtschenkoiActinidia chinensis36.5140.5698.241420forward
CNT30147396Kalanchoe fedtschenkoiMedicago truncatula35.7946.7998.641392forward
CNT30438197Kalanchoe fedtschenkoiAegilops tauschii26.2597.5298.731021forward
CNT30140161Kalanchoe fedtschenkoiLolium perenne35.4140.4598.041377forward
CNT3017954Kalanchoe fedtschenkoiZea mays35.5936.5397.181384forward
CNT30655407Kalanchoe fedtschenkoiRosa chinensis35.240.9598.831369forward
CNT30628241Kalanchoe fedtschenkoiDaucus carota34.2249.399.41331reverse complement
CNT30721631Kalanchoe fedtschenkoiTriticum spelta35.2539.4897.671371forward
CNT30429739Kalanchoe fedtschenkoiPapaver somniferum33.4840.4794.091302forward
CNT30571858Kalanchoe fedtschenkoiVitis vinifera50.9957.2194.451983reverse complement
CNT3038324Kalanchoe fedtschenkoiCucumis melo40.4583.495.31573reverse complement
CNT30603680Kalanchoe fedtschenkoiOryza punctata35.4134.8997.971377forward

Expression of CNT30216563

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MHWMDARALRRKDAKDAKGRGEIPSVIRGSPIGKPYPSSVASLRSLDYNNLAK*

>peptide 2 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKIYQGSSDSPKRRDLESSFFKCQ*

>peptide 3 (58 aa)
TEVVVVFVVACSSLFFHRDWVGVKFTEACVAYAKQAYIGYKIEKNALDGCPGIEKEGR*

>peptide 4 (55 aa)
MMSMARGRALNGLGWPPFRLTNPRETPNTGLDRLYRQTFWVLRSKVERETAQIVR*

>peptide 5 (43 aa)
MPGFGSAHLLTPFEALYSVRFSFLMCRSASRTSLSHFRLFNLQ*

>peptide 6 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

Sequence

>CNT30216563
TCACGGAGGTTGTTGTAGTTTTCGTAGTTGCTTGTAGTTCTCTTTTTTTCCATCGAGATTGGGTTGGTGTTAAGTTTACCGAAGCTTGTGTAGCCTATGC
GAAGCAAGCCTACATAGGGTACAAGATAGAAAAGAATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTAAAGACGCGAAAGGCCGTGGGGA
GATACCGTCTGTGATCCGTGGATCTCCGATCGGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCTCTTTGGACTATAATAACTTAGCGAAGTGAAAC
ATCTGAGTAGCTAAAGTAAGGGAAATCAACCGAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGATTGGGGGTTTGAAGAAAAAGAAACACGAAGAAAAAC
CTCAGCAAAGTGTTCACTTCTTTTTTTCGCCAGGTTTCATTCGATTTGTTGTGGATGATGGAAAAACAAGCTACGGCTTCAAAGCTTACCTTATTATTAT
TCAAAGGAGAAAGGGCTCTTTAGATTAAGAGGTGAGTCAGGGGGGCGGAGCTTGAAGAGCGAAGCCATAGCGCTAGCCTATTACGTTTTTCAGCAGCAAG
CTACGGTCTAACGACCCCCTAACCTAGGTTGGGGCGAAAACTCCAAAACAAGGGTTCCAAACCTTTATCTAATAATAAGGTAAGCTTTCAAGCCCCTTTA
CTTTCCATTCTATTAGTAAAGGGCGCAGTGAACTGTAATTGTGAAAAGGTTGGAAGATCTGGCCAAAGAAGGTGATAGCCCTGTAGATTCGTTCCCATGG
TTCGATCCTTCCCAGTAAAACGCGGCGTGTTAGAATTCTGATCGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTCTTCCTCAATGACCGA
TAGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCCTATTTAGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCGGA
GCTTAGAGCCTTTACTTTCCATTCTATTAGTAAAGCGCACTCACTCTAACGGCGTACCTTTTGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTA
AGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAATCTTATATATAGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGA
GCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGG
TTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCCATTTCGCCTTACCAACCCCA
GGGAAACTCCGAATACAGGCCTAGATCGTTTGTACAGACAGACTTTTTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGG
TCCCTAAGCAATCACCTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCA
CTGGTCTAGCTCCATGGCACCGAAAATTTATCAGGGCTCAAGTGATTCACCGAAGCGACGAGACCTTGAAAGCAGCTTTTTCAAGTGTCAGTAGCGGGAC
GTTCTGTCAATCGGGGAAGGTTTTTGGTGACAACACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGAGAAATCCTGTGAAAAACACGATCG
CCTGCCAGTGGAAGGCTTTCTGCGTTCAGTCAATCTACGCAGAGTGAATCGGTCCCTAAGGAACCCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAG
TGACGAAGTTGCTTTGACTACAGAACCATGCCTTCCTGTTGGAGCGAATTGGATGATCGGGCCGAGGGCAACAAAGCGCCTCTTCCCCTCACTATCCTTT
CCCTAATATGAACCTTGAGTCATTAAAGCCTTTCTGACTCGGCCCAGCGGGCGAACATGCCGGGCTTCGGCTCCGCGCACCTGCTGACACCTTTCGAAGC
ACTTTATAGTGTGCGCTTTAGTTTTCTAATGTGTCGTTCAGCGTCACGAACAAGCCTTTCTCATTTCCGCCTTTTTAATCTTCAGTAGGGGTCGCGAGAG
AGCAGAGCGTACCGCCCTGCCATAGTCGCGAGTCTGTTTATAGTCGCGACTGTTGTCATAGTCAACAAGGTTGAAACTTCCAGGAAAAAACTTCGAATTG
GGAGGGCGATCCCCCCGGTGAACTGACCGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAGGAACTC
GGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTCCTATCTTTTTCTTAGGAAAGCGGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACAC
AGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGGAAGGAGAAGTGTTCTAAGCTTTGAATAGAAGCCCCG
GTAAACGGCGGCAGTAACTCTAACTGTCCTAAGGTAGCGAAATTCCTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTC
CGACATGGACCCGGTGAAATTGAATTCTCCGTGAAGATGCGGAGTACCAACGGCTAGACGGTAAGACCCCGTGCACCTTAACTATAGCTTCGCAGTGACA
ACCTTGATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAACGACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCGCACCGA
TCATTCGGGGGGGGCGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGGTGTGCGAAGGTAGGCTCAAGCTAAGA
TTCTGCTCGTGAGCGTAATGGTATAAGCCTGCCTGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCCCGTGTGG
AAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATAACAGGCTGATGACTCCCAAGAGCTCTTATCGACGGAGTCGTTTGGCACCTCGATGTCGAC
TCATCACATCCTGGGGTTGAAGAAGGTCCCAAGGGTTCGGTTGTTCGCCGATTCAAGTGGTACGTGAGTTGGGTTTAGAACGTCGTGAGACAGTTCGGTT
CCTATCTACCGTTGGTGTTAAAGGGAGAACTGCGAGGAGCCAACCCTAGTACGAGAGGACTGGGTTGGGCCAACCTATGGTGTACCGGTTGTTATGCCAA
TAGCAGCGCCGGGCAGCTAAGTTGGTATGGAAGAACTGCTGCGCCGCGGGAAATCCTTCTCTATACAAGTTCTCGGACGAGGTTTTTGAACAGAACTTCG
ATAGGCGAGAGGTGTAAGCACCGCGAGGTGTGAAGCGATCTCGTACTAAACGAAACGACTTTCACTTTCAATAACCAAAATGAAAGAAAGTCAACCTATT
ATAGTATAGAGTGAAAGCAAGAAAGTGAGTATACCGAAGACAGCCCCTTAGCGTCAAACACAAAACAAGTAAACTACTAAAGTCTTCTCGTTTATAAGAG
AGTGCTAGCATTAAGGGAAGCGGGGTAGAGGAATGGTCAACTCATCCGGCTCATGACCGGAAGATTGCAGGTTCGAATCCTGCCCCCGCCACTAATCACT
CTTCATTCGATAGGGATTGTTTAGACCGAGAAACCTGCGCCCAATAGAGCCTAGCCATGAGTTGATCCGAAATGGGTCCGCGAAGCCGG