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Detailed information on CNT30216184


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7DMP0|CALM2_SOLTU, E-value = 3e-41

BLAST vs NONCODE:
NONSLYT003545, E-value = 1e-43

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672655Kalanchoe fedtschenkoiSetaria viridis40.9537.5586.93199forward
CNT30545709Kalanchoe fedtschenkoiIpomoea triloba33.1317.2485.09161forward
CNT30617519Kalanchoe fedtschenkoiSesamum indicum40.539.8184.26197forward
CNT30379145Kalanchoe fedtschenkoiManihot esculenta39.0942.2284.74190forward
CNT30487677Kalanchoe fedtschenkoiOlea europaea16.4622.0487.580forward
CNT30156599Kalanchoe fedtschenkoiPistacia vera39.9225.7384.54194forward
CNT3097357Kalanchoe fedtschenkoiSolanum tuberosum40.959.9583.92199forward
CNT30387589Kalanchoe fedtschenkoiTriticum turgidum40.959.5685.93199forward
CNT30560106Kalanchoe fedtschenkoiActinidia chinensis40.9537.4182.91199forward
CNT30586817Kalanchoe fedtschenkoiMusa acuminata32.7215.9386.16159forward
CNT3085845Kalanchoe fedtschenkoiVigna radiata24.699.1683.33120forward
CNT30234205Kalanchoe fedtschenkoiBrassica oleracea32.7230.6483.02159forward
CNT30553743Kalanchoe fedtschenkoiOryza glaberrima39.325.7185.86191forward
CNT30248464Kalanchoe fedtschenkoiAvena sativa32.7226.1187.42159forward
CNT30311950Kalanchoe fedtschenkoiCamelina sativa39.5126.6386.98192forward
CNT3073928Kalanchoe fedtschenkoiBrassica juncea32.7236.384.28159forward
CNT3014113Kalanchoe fedtschenkoiZea mays28.8129.9887.86140forward
CNT30607166Kalanchoe fedtschenkoiGossypium raimondii27.9837.2687.5136forward
CNT30231884Kalanchoe fedtschenkoiAnanas comosus39.0918.0385.79190forward
CNT30204543Kalanchoe fedtschenkoiHelianthus annuus22.0248.8685.05107forward
CNT30346128Kalanchoe fedtschenkoiEragrostis tef44.2435.8983.72215forward
CNT30479425Kalanchoe fedtschenkoiArabidopsis halleri39.332.5983.77191forward
CNT30367748Kalanchoe fedtschenkoiSorghum bicolor40.9551.1687.94199forward
CNT3025976Kalanchoe fedtschenkoiPopulus trichocarpa13.5821.2287.8866forward
CNT30120491Kalanchoe fedtschenkoiCitrus clementina29.224084.51142forward
CNT3037982Kalanchoe fedtschenkoiCucumis melo40.9536.0582.91199forward
CNT30332036Kalanchoe fedtschenkoiDioscorea rotundata32.349.8485.35157forward
CNT30149356Kalanchoe fedtschenkoiBrachypodium distachyon40.958.5386.93199forward
CNT30101815Kalanchoe fedtschenkoiOryza rufipogon23.2520.8584.96113forward
CNT30576402Kalanchoe fedtschenkoiOryza barthii39.325.3785.86191forward
CNT30496612Kalanchoe fedtschenkoiDigitaria exilis29.2220.9486.62142forward
CNT30116198Kalanchoe fedtschenkoiOryza nivara36.0113.2683.43175forward
CNT30594303Kalanchoe fedtschenkoiEragrostis curvula40.9531.0588.94199forward
CNT30175579Kalanchoe fedtschenkoiVigna angularis24.6920.7384.17120forward
CNT30335796Kalanchoe fedtschenkoiCynara cardunculus32.7239.9581.76159forward

Expression of CNT30216184

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MKFQRTRMNMKFIDCKYHSTKQILKRKHHMNTKQLIWPSPSTSASRIISSTSSSVSFSPKLVMTWRSSAAEMKPF*

>peptide 2 (36 aa)
MAKFSSRDETILILVEDSESFLEFFLGVCVLHLPGH*

Sequence

>CNT30216184
AGCTGCTCCGGCATCAGGTAAAGATAAAACCTTAAAAACTGTTGTTGGAAATAAATTTTGTGGGTACCTGTTTGGAAGAACATGACTTCTGTCGAATCAA
AATTACATTTACATTGAGAACTGTACTAGAGCGATTTGCAGTTGAAATCCTGAGCGCAGATAAATCTTAGGAAGAACTGAGCAAATGAAATTTCAGAGGA
CACGGATGAATATGAAGTTCATAGATTGCAAGTACCACTCAACAAAGCAAATCTTAAAACGGAAACACCACATGAATACTAAGCAGTTGATCTGGCCATC
ACCATCTACGTCAGCTTCACGGATCATCTCGTCGACTTCCTCATCAGTTAGCTTCTCGCCCAAGTTGGTCATGACATGGCGAAGTTCAGCAGCAGAGATG
AAACCATTCTGATCCTTGTCGAAGACTCTGAAAGCTTCCTTGAGTTCTTCCTCGGAGTCTGTGTCCTTCATCTTCCTGGCCATTAG