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Detailed information on CNT3021612


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692810Citrullus lanatusOryza sativa47.297.5995.8396forward
CNT30378681Citrullus lanatusArabidopsis thaliana47.299.9795.8396forward
CNT30501325Citrullus lanatusCoffea canephora44.333.8995.5690reverse complement
CNT30618776Citrullus lanatusSesamum indicum44.334.3695.5690reverse complement
CNT30401845Citrullus lanatusBeta vulgaris43.3512.8189.7788reverse complement
CNT3095573Citrullus lanatusSolanum tuberosum21.6710.8990.9144forward
CNT30300480Citrullus lanatusTriticum aestivum47.297.3397.9296forward
CNT3089384Citrullus lanatusVigna radiata45.8111.4595.793forward
CNT30540534Citrullus lanatusBrassica napus47.298.3698.9696forward
CNT30555706Citrullus lanatusOryza glaberrima42.8612.796.5587forward
CNT3018289Citrullus lanatusZea mays47.783.7493.8197forward
CNT30655381Citrullus lanatusRosa chinensis48.7718.598.9999forward
CNT30626002Citrullus lanatusDaucus carota47.2916.1697.9296forward
CNT30684652Citrullus lanatusTriticum urartu47.2912.4297.9296forward
CNT30360309Citrullus lanatusLactuca sativa47.2916.797.9296forward
CNT30412585Citrullus lanatusPapaver somniferum36.954.339275forward
CNT30119671Citrullus lanatusCitrus clementina36.455.2187.8474forward
CNT3035046Citrullus lanatusCucumis melo45.323.5592.3992forward
CNT30147990Citrullus lanatusBrachypodium distachyon47.296.3494.7996forward
CNT30104494Citrullus lanatusOryza rufipogon41.8736.9690.5985forward

Expression of CNT3021612

Sequence

>CNT3021612
CCCCGTCAGAAAAGCTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCAT
ATGTCGTCTAGGCGTTCCTTGTTGCTCCGATCTCCCCTACGCCTAGGGCGTTGTCTGGGCCAAGAGCCATAGTTAGTTGCTGTTTCCATTTGCTTGTTTT
TTT