Detailed information on CNT30215974


BLAST search results

BLAST vs Swiss-Prot:
sp|P26845|NU1M_MARPO, E-value = 3e-29

BLAST vs NONCODE:
NONMEST004538, E-value = 9e-43

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671235Helianthus annuusSetaria viridis15.329.0291.07112forward
CNT30531354Helianthus annuusEucalyptus grandis89.3424.5188.23654forward
CNT30317759Helianthus annuusCorylus avellana89.8932.2789.67658forward
CNT30518502Helianthus annuusJuglans regia34.1565.2791.6250forward
CNT30615574Helianthus annuusSesamum indicum89.8944.1991.64658forward
CNT3020678Helianthus annuusCitrullus lanatus16.1230.5789.83118forward
CNT30406240Helianthus annuusBeta vulgaris32.6592.2890.79239forward
CNT30201817Helianthus annuusPisum sativum40.1647.5791.16294forward
CNT30712407Helianthus annuusGlycine max90.1653.2384.24660forward
CNT30569544Helianthus annuusActinidia chinensis89.8917.8189.97658forward
CNT30237694Helianthus annuusBrassica oleracea28.5519.0990.91209forward
CNT30264063Helianthus annuusBrassica rapa14.7528.5791.67108forward
CNT30608772Helianthus annuusGossypium raimondii42.6299.3689.42312forward
CNT30624957Helianthus annuusDaucus carota27.1912.5289.95199forward
CNT30689544Helianthus annuusTriticum urartu73.098.5782.06535forward
CNT30596717Helianthus annuusOryza meridionalis52.4641.2987.5384forward
CNT30360555Helianthus annuusLactuca sativa85.7957.3594.59628forward
CNT30151942Helianthus annuusPrunus persica89.8928.0487.69658forward
CNT3057989Helianthus annuusAmborella trichopoda69.2696.5786.59507forward
CNT3035415Helianthus annuusCucumis melo54.3759.5888.44398forward
CNT30148081Helianthus annuusBrachypodium distachyon52.4637.9186.2384forward
CNT30116024Helianthus annuusOryza nivara37.5761.3886.91275forward

Expression of CNT30215974

Peptides detected in this lncRNA

>peptide 1 (29 aa)
ISIKNKILVSFSCLRQVVNIDVFFYSERS*

Sequence

>CNT30215974
GAATATCTATAAAAAATAAGATACTTGTTTCTTTCTCTTGTTTGAGACAAGTCGTGAATATAGACGTATTTTTTTACAGTGAAAGAAGTTGAGAAGAAGT
TGTTAATAATAGATTACCTAGAGAAATAGGTAAAAGAAATTTCCATCCAAGATTTAATAATTGATCCATTCTCAGCCACGGTAGAGTCCATCTTGTTACG
ATAGGAATGAACAAGAACAATATGTTTTAGCTAATGTGATAAAGATACCAATTATTGTTCCAAAGACTCTACCTCTTTTAGTAATATCAAAAAGCTCGGG
AACAGGTATGTACGGAATTGAAAGATTCCAACCCCCCAAGTAAAGATTTGTTACAAATAATGAAGAAACCAGTAGATTTAAATATGAAGCAACGTAAAAT
AAACCAAATTTGATACCAGAATATTCGGGGTGATAACCTGCTACTAATTCTTCTTCTGCTTCTGGTAAATCAAAAGGTAATCGTTCACACTCGGCTAGGG
AAGAAATTAGAAAAACTAGAAACCCTATAAGTTAACGCCACAAATTCCATCCCCAAAAACCATATTTTGACTGCGCTTCAACTATATCAACTGTACTTGA
ACTGTTAGATAGTAGAGATATTGATAACACACATAGAGTTAATGGTATTTCATAACTAATTGATTGAGCATGAGCTCGTAGACCACCTAAAAAAGAATAT
TTATTATTTGGGCCATATCCTGACATAAGAAG