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Detailed information on CNT30215809


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30481523Helianthus annuusChara braunii9.1827.0895.3865reverse complement

Expression of CNT30215809

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MFQGLGCSPIKAVRELGSKHRETVRFISGVGVRALRGPFPSTRGPGRTHLWCTSYRAHGKRWVAKCGADNC*

>peptide 2 (35 aa)
ARALRTAGRRLALECKGRRELDCKTHPSSRDESRP*

>peptide 3 (58 aa)
PGPYGRPDGDWPSSAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVAQRIKVTLGITG*

Sequence

>CNT30215809
GCCAGGGCCTTACGGACGGCCGGACGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTC
GGCCTTAGTGATCCGACGGTGCCTAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTGATCTTCCCCAAGAGCTCACATCG
ACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTAGGTTGTTCGCCCATTAAAGCGGTACGTGAGCTG
GGTTCAAAACATCGTGAGACAGTTCGGTTCATATCTGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAGGACCGGGAAGGACGCACC
TCTGGTGTACCAGTTATCGTGCCCACGGTAAACGCTGGGTAGCCAAGTGCGGAGCGGATAACTGTTGAAAGCATCTAAGTAGTAAGCCCACCCCAAGATG
AGTGCTCTCCTATTCCAACTTCCCCAGAGCCTCCGGTAGCACAGCCGAGATAGCGACGGGTTCTCTGCCCCTGCGGGGATGGAGCGACATAAGTTTTGAG
AATTCAAGGGAAGGTCACGGCGAGACGAGCCGTTTATCATTACGATAGGTGTCAAGTGGAAGTGCAGTGATGTATGCAACTGAGGCATCCTAACAGACCG
GTAGACTT