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Detailed information on CNT30215737


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9BBQ5|PETD_LOTJA, E-value = 3e-51

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618210Helianthus annuusSesamum indicum34.4350.7294.29105reverse complement
CNT30407229Helianthus annuusBeta vulgaris45.5740.6486.33139forward
CNT30632300Helianthus annuusVigna unguiculata82.6232.8691.67252forward
CNT30201894Helianthus annuusPisum sativum73.4412.5890.62224forward
CNT30708642Helianthus annuusGlycine max52.1333.3393.08159forward
CNT30556068Helianthus annuusOryza glaberrima76.7231.8890.17234forward
CNT30145111Helianthus annuusMedicago truncatula62.342.5192.11190forward
CNT30435040Helianthus annuusAegilops tauschii76.7226.0391.88234forward
CNT30662532Helianthus annuusTriticum dicoccoides76.7233.9690.6234forward
CNT30309624Helianthus annuusCamelina sativa71.4851.6689.91218forward
CNT30230699Helianthus annuusAnanas comosus89.5146.7589.38273forward
CNT30622073Helianthus annuusCajanus cajan77.759.193.25237forward
CNT30419844Helianthus annuusPapaver somniferum89.5145.7390.84273forward
CNT3025179Helianthus annuusPopulus trichocarpa95.7436.590.75292forward
CNT30104480Helianthus annuusOryza rufipogon69.1841.6289.1211forward
CNT30336835Helianthus annuusCynara cardunculus21.6410.5993.9466forward

Expression of CNT30215737

Peptides detected in this lncRNA

>peptide 1 (61 aa)
NIIRVIFPKELQTDLLVHQSLMVLEPLSLRYMQSCLELLPEKYIKDRSAMRAPRNNYDPYL*

>peptide 2 (54 aa)
KYHSSNISKGVANGSVGSPIINGSRTAKPTLHAIVPRITTGKIYKRSFGHAGSP*

Sequence

>CNT30215737
AAATATCATTCGAGTAATATTTCCAAAGGAGTTGCAAACGGATCTGTTGGTTCACCAATCATTAATGGTTCTAGAACCGCTAAGCCTACGTTACATGCAA
TCGTGCCTAGAATTACTACCGGAAAAATATATAAAAGATCGTTCGGCCATGCGGGCTCCCCGTAATAATTATGACCCATACCTTTAGCCAATTTAGCTCT
TAATACAGGATCATTCAAGTCAGGTTTTTTTGTTACTCCCATAATCCATTTTCTCTTCACAAAATTCCCTTCAACTATTGATGCCAAATCCAAAATATTG
CGGAG