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Detailed information on CNT30215429


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678637Helianthus annuusSetaria viridis54.5594.5894.79384reverse complement
CNT30524663Helianthus annuusSetaria italica51.8562.7191.78365forward
CNT30641718Helianthus annuusNymphaea colorata53.9870.2497.37380forward
CNT30494210Helianthus annuusOlea europaea29.978.6483.41211reverse complement
CNT30220355Helianthus annuusHordeum vulgare40.3494.9896.48284forward
CNT30720843Helianthus annuusTriticum spelta28.4193.0286200forward
CNT30363261Helianthus annuusSorghum bicolor49.2927.2691.07347forward
CNT30331560Helianthus annuusDioscorea rotundata45.7463.7693.17322reverse complement
CNT30174498Helianthus annuusVigna angularis51.1471.2996.67360forward
CNT30551087Helianthus annuusOryza brachyantha42.76101.0188.04301reverse complement

Expression of CNT30215429

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTRGPGRTHLWCTSYRAHGKRWVAKCGADNC*

>peptide 2 (57 aa)
IWACKEDGDWPSSAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVAQRIKVTLGITG*

Sequence

>CNT30215429
ATTTGGGCTTGTAAAGAAGACGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCC
TTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTAATCTTCCCCAAGAGCTCACATCGACGG
GAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGCTGTTCGCCCATTAAAGCGGTACGTGAGCTGGGTT
CAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAGGACCGGGAAGGACGCACCTCTG
GTGTACCAGTTATCGTGCCCACGGTAAACGCTGGGTAGCCAAGTGCGGAGCGGATAACTGCTGAAAGCATCTAAGTAGTAAGCCCACCCCAAGATGAGTG
CTCTCCTATTCCAACTTCCCCAGAGCCTCCGGTAGCACAGCCGAGACAGCGACGGGTTCTCTGCCCCTGCGGGGATGGAGCGACAGAAGTTTTGAGAATT
CAAGAGAAGGTCACGGCGAGACGAGCCGTTTATCATTACGATAGGTGTCAAGTGGAAGTGCAGTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAG
ACTT