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Detailed information on CNT30215427


BLAST search results

BLAST vs Swiss-Prot:
sp|P84563|PSAD_POPEU, E-value = 2e-13

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377112Helianthus annuusArabidopsis thaliana24.0913.5283.7286forward
CNT30651308Helianthus annuusRosa chinensis30.8119.181.82110forward
CNT30477824Helianthus annuusArabidopsis halleri25.2127.0383.3390forward
CNT30356415Helianthus annuusLactuca sativa35.8536.8986.72128forward

Expression of CNT30215427

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MGEGVFGSSSGGVNPAGASLTGAGVGVGEPSAAVGVVRGGEGGLVEWVGEGWGEEGSLSSHGH*

Sequence

>CNT30215427
GGAGACTCCCATGTGATGACGTAGAACTCTTCCACTTGGGCTTTTCGGAGTAAACCGCCGGTGGATCCGGCGAAGATGGGGGAGGGGGTGTTTGGGTCGA
GTTCGGGTGGGGTGAACCCGGCTGGGGCTTCTTTGACTGGGGCGGGAGTGGGGGTGGGTGAGCCTTCGGCTGCGGTGGGTGTGGTTAGGGGTGGTGAAGG
AGGATTGGTTGAATGGGTTGGAGAGGGTTGGGGTGAAGAGGGAAGCTTGAGTAGCCATGGCCATTGAAGATCAAGATCAGGTGGTGGTGGTGTTTGTAGA
GAATGAAATGTATTGAGGGGAAGATGGATTATGTGGAGGTGAGTGGGATAAGGTGAT