« Back to Citrullus lanatus search


Detailed information on CNT3021511


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730571Citrullus lanatusCorchorus capsularis51.6516.1284.88172forward
CNT30495244Citrullus lanatusOlea europaea34.5336.0586.09115reverse complement
CNT30234519Citrullus lanatusBrassica oleracea28.838.5690.6296forward
CNT30154398Citrullus lanatusPrunus persica17.4220.9491.3858forward

Expression of CNT3021511

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MKIKKIHCSNLILIEFEYQNSGYSHDSTG*

Sequence

>CNT3021511
TTTTCTTATATAGATAGAAATTGATCTTATCCTCTGTTATCTTCTGTTTTGGAATCAAAGAAAGATATTTTTAACCGGCTCATATGTTGTGACTTGGAAT
AAACGTTTCTCTGTGGAGAAGGGGAAATATCAATTTTTTCCTATAGAACGTCTACAAACAAGAGGATTTAATCGGAAATATCGACAGATTCCTGTGTGTG
GAGTCCAAATAAATATGAAAATAAAAAAGATCCACTGTTCTAATTTAATCCTTATCGAATTTGAATATCAGAATAGTGGATATAGTCATGATTCAACGGG
TTAGGTCCACTTACTTTTTATTTTTTTTTTTTG