« Back to Citrullus lanatus search


Detailed information on CNT3021497


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30714542Citrullus lanatusMalus domestica golden2020.288.3360forward
CNT3050380Citrullus lanatusCucumis sativus84.6796.2185.04254forward

Expression of CNT3021497

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MRSTCLPIPRRELGLALWTKDQSALPLDWRKLREAGITEQRHLLLSSVDGLRASS*

>peptide 2 (61 aa)
PSQVTKACNLCGGSEVVGSLSFLFGWDLDEVHLLAHSKKGVGPCTLDERPKCTAFRLEETA*

Sequence

>CNT3021497
CGCCGAGCCAAGTAACAAAGGCTTGTAACCTATGTGGGGGCTCTGAGGTGGTTGGAAGTTTGTCCTTCCTATTTGGTTGGGACTTGGATGAGGTCCACTT
GCTTGCCCATTCCAAGAAGGGAGTTGGGCCTTGCACTTTGGACGAAAGACCAAAGTGCACTGCCTTTAGATTGGAGGAAACTGCGTGAGGCTGGCATAAC
AGAGCAGCGTCACCTCCTGCTCTCGTCAGTGGACGGATTACGAGCAAGTTCTTAAAGGCCCAATATTGCCTCGTGGGATTTTCTGAACCTGACAACCACC