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Detailed information on CNT3021494


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515141Citrullus lanatusJuglans regia20.4212.9981.02137forward

Expression of CNT3021494

Peptides detected in this lncRNA

>peptide 1 (32 aa)
ADHFKVVQICTSGLSANDRAKLVEALGFWLSC*

>peptide 2 (50 aa)
MFSINSKKKYCVGLARPRFSFGEVQILCALYLLLLVISIHEQKLIKFKLF*

>peptide 3 (59 aa)
MAGILGYRGLGAKTKNIVVAGGLTAFVFGVYFYTMRAVGGSDELQVAIDQFEAQKSNKD*

Sequence

>CNT3021494
TGCAGACCATTTTAAGGTCGTCCAAATCTGCACGTCAGGACTCTCAGCCAACGATCGAGCAAAGCTAGTAGAAGCATTAGGGTTTTGGCTTTCGTGTTAA
TCCTCAAGCGTTAAAAGCTCGAAAATAGCAGTGTGTTTGGCTGCTAAATGGCTGGAATTTTGGGATATAGGGGCCTTGGAGCCAAGACAAAGAATATTGT
TGTTGCCGGAGGTTTAACTGCCTTCGTTTTCGGGGTATATTTCTACACGATGAGAGCTGTTGGAGGTTCAGATGAACTGCAAGTAGCCATAGACCAATTT
GAAGCACAGAAAAGCAACAAAGATTAGAACCATGAACCTTGTTTTTTCATTGATATTCTTGAGACCACAACAATGACGAAGCCATTGAAACACCACTGAG
TTTGACTCTTTTTTACTGCCTTATAGCTCTGTGAAAATAACGAATTTATCGCCCTTTATTGCCAATAATATGTTTTCCATCAACTCTAAGAAGAAATATT
GTGTTGGGTTGGCCAGGCCACGTTTTTCTTTTGGGGAAGTTCAAATATTATGTGCTTTGTATCTACTACTTCTAGTGATTTCAATACATGAACAGAAATT
AATTAAATTCAAACTCTTTTAGTCCTTAAACCATTCAAACTCTTTTAGTCCTTAAGCGGGTTTGGTTCGCA