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Detailed information on CNT3021491


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001412, E-value = 6e-45

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30508578Citrullus lanatusSolanum lycopersicum36.8642.9196.52115reverse complement
CNT3067934Citrullus lanatusLeersia perrieri54.4974.5691.76170reverse complement

Expression of CNT3021491

Peptides detected in this lncRNA

>peptide 1 (55 aa)
VQKSHFHFQVVFDRLRINQYSIDWSEVIDKKDLSKSLRFFLSKLLDRMCRIGGRW*

Sequence

>CNT3021491
CGTGCAGAAGAGCCATTTTCATTTTCAAGTAGTGTTCGATCGATTACGTATTAATCAATATTCGATTGATTGGTCTGAGGTTATCGATAAAAAAGATTTG
TCTAAGTCACTTCGTTTCTTTTTGTCCAAGTTACTTGATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAACGACCAATCCTGAAAGACCACTCT
TTCGTCTAAGGATGCCTAACCGCCGCACCGAGTTTTCGGGGGGGGGGGGGGCGGGACACTGCAAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAG
AGTAACGGAGGT