Detailed information on CNT3021423


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550263Citrullus lanatusIpomoea triloba48.530.8691.9299reverse complement
CNT30713027Citrullus lanatusMalus domestica golden62.753.6389.06128forward
CNT30152240Citrullus lanatusPrunus persica62.751.4690.62128forward

Expression of CNT3021423

Peptides detected in this lncRNA

>peptide 1 (36 aa)
KISLAKTKFVKEIKKKKKKGKFCLSFQRNHSKMRVR*

>peptide 2 (35 aa)
KNLSGKNEIRQRDKKEKKEREVLSFFPKKPLKNES*

Sequence

>CNT3021423
AAAAATCTCTCTGGCAAAAACGAAATTCGTCAAAGAGATAAAAAAGAAAAAAAAGAAAGGGAAGTTTTGTCTTTCTTTCCAAAGAAACCACTCAAAAATG
AGAGTTAGATAAAGAAGTTTCACTAAGAACTAGCACTAGACTTCTTCCCCCCTTTCGACTTTTCCTCTCTCCTTTTGTGCTTCTACCCCGGCTTTTCATT
CTGA