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Detailed information on CNT3021413


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3036405Citrullus lanatusCucumis melo42.0936.3489.7165forward
CNT3049669Citrullus lanatusCucumis sativus52.366.3486.83205forward

Expression of CNT3021413

Peptides detected in this lncRNA

>peptide 1 (46 aa)
RIYLSRQDLREGFELCSSFLTIDMDNNRNSLKLARTIFNFLKRSKH*

>peptide 2 (30 aa)
MTAIIQKERYNRLLKTQRQNANAWRFDNCY*

Sequence

>CNT3021413
CTCGGATATATTTATCACGTCAAGATCTTAGAGAAGGATTCGAACTCTGTTCTTCATTTTTAACCATAGATATGGATAACAACAGAAACTCTCTTAAATT
AGCACGTACCATTTTTAATTTCTTAAAGCGAAGCAAACACTAAACAGACATGGATAAACAAAGAGATCTTAAACTAAGAAGATCACCGACTGAAGCATAA
CAACAGATCATATAAGTTTTTCCACAACTCCATGACTGCTATTATTCAAAAGGAACGCTACAATCGACTCTTAAAGACGCAACGACAGAACGCAAACGCT
TGGAGATTTGATAATTGTTATTAAGAAGGATGCATACTATTAGTACTCAAACAGAATCTCCACTTGAGAAGACTTGAGCAGCTGCTGCTCAT