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Detailed information on CNT30214058


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515171Helianthus annuusJuglans regia28.037.8410074forward
CNT30176867Helianthus annuusSecale cereale28.797.2310076reverse complement
CNT30284406Helianthus annuusTriticum aestivum28.416.3810075forward
CNT30565764Helianthus annuusActinidia chinensis26.145.2794.269reverse complement
CNT30544956Helianthus annuusBrassica napus28.417.939675reverse complement
CNT30237803Helianthus annuusBrassica oleracea28.417.2510075forward
CNT30435670Helianthus annuusAegilops tauschii28.795.2310076forward
CNT30657199Helianthus annuusTriticum dicoccoides28.799.4398.6876forward
CNT3079106Helianthus annuusBrassica juncea24.6224.3410065reverse complement
CNT30260188Helianthus annuusBrassica rapa28.035.7891.8974reverse complement
CNT30461595Helianthus annuusSaccharum spontaneum21.977.293.158forward
CNT3012850Helianthus annuusZea mays22.734.9593.3360forward
CNT30680400Helianthus annuusTriticum urartu21.591.1189.4757forward
CNT30154097Helianthus annuusPrunus persica27.653.1910073reverse complement
CNT30107453Helianthus annuusOryza longistaminata27.6527.5598.6373reverse complement
CNT3035140Helianthus annuusCucumis melo28.7930.8998.6876reverse complement
CNT30112149Helianthus annuusFicus carica28.039.4398.6574forward

Expression of CNT30214058

Peptides detected in this lncRNA

>peptide 1 (36 aa)
ARLAQLVERKALNLVVVGSSPTVGDQFLFYFFRQCV*

Sequence

>CNT30214058
CAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGATCAATTTCTGTTTTACTTTTTTCG
ACAATGTGTTTAATTGTACGTTAGCTGGTGTATCCTTCCTATAACGATCTGATATATCAATTTACAAAATTCACTTAAAACATAAAGGCCCGTCTAGCTC
AGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGTAGA