Detailed information on CNT30213928


BLAST search results

BLAST vs Swiss-Prot:
sp|P93276|M030_ARATH, E-value = 2e-25

BLAST vs NONCODE:
NONORUT000582, E-value = 3e-49

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30508435Helianthus annuusSolanum lycopersicum55.116.4585.48124reverse complement

Expression of CNT30213928

Peptides detected in this lncRNA

>peptide 1 (32 aa)
LDSDAFRGERPWGDIVCDPWISDRETVSKLRG*

>peptide 2 (45 aa)
VWIRMLSEAKGHGEISSVIHGSPIGKPYPSSVASLRSLDFSNLVN*

Sequence

>CNT30213928
GTTTGGATTCGGATGCTTTCAGAGGCGAAAGGCCATGGGGAGATATCGTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAAGCTCCGTGGCTA
GTCTGCGCTCTTTGGACTTTTCAAACTTAGTGAACTGAAACATCTGAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTATTAGCGGCGAGCGAGA
GCGGATTGGGGCTTTCAAGAAAAAC