Detailed information on CNT30213636


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9S7M0|CB3_ARATH, E-value = 6e-81

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629897Helianthus annuusVigna unguiculata37.5514.0484.3172forward
CNT30510187Helianthus annuusSolanum lycopersicum39.0820.2983.24179forward
CNT30309482Helianthus annuusCamelina sativa22.2738.285.29102forward

Expression of CNT30213636

Peptides detected in this lncRNA

>peptide 1 (72 aa)
ALSMDKVRVPKVVQTTFRENLGAGLEPNWLLEIHFHPLFKHLGCDAPQGTKHGPSSMDDLKSPILGKSLGIS*

>peptide 2 (36 aa)
MHPRAPSMAHRPWMTSRARFLAKASGSADKPAVSQP*

Sequence

>CNT30213636
GCTCTGAGCATGGACAAGGTTCGGGTTCCCAAGGTAGTCCAGACCACCTTCAGAGAAAATCTGGGCGCCGGCCTTGAACCAAACTGGCTCCTTGAAATCC
ACTTTCACCCACTTTTCAAGCACCTCGGGTGTGATGCACCCCAGGGCACCAAGCATGGCCCATCGTCCATGGATGACCTCAAGAGCCCGATTCTTGGCAA
AAGCCTCGGGATCAGCTGACAAACCTGCTGTGTCCCAACCATAGTCACCCGGGAATTCACCCGTCAAGTAAGATGGGGTCTGAGCCGAGAAGGGTCCCAA
GTACTTCACACGGTCAGGCATAGAGACCATATCTCTTAAGGGGTTGAGGCTAGATGGTCTAGTTTGACCCAAGAAGGGTGTGGCTTGGACCACGGTGGTG
GAGCTAGCAGCGGCAGCCATTGATGGAGGATTTCTTTGGTGGTTGAAACTTGAAAAGA