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Detailed information on CNT30213268


BLAST search results

BLAST vs Swiss-Prot:
sp|P93431|RCA_ORYSJ, E-value = 4e-136

BLAST vs NONCODE:
NONTCAT000366, E-value = 1e-34

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698101Helianthus annuusQuercus lobata7.3321.8182.96135forward
CNT30379330Helianthus annuusManihot esculenta10.6338.7484.18196forward
CNT30564971Helianthus annuusActinidia chinensis6.7843.488125forward
CNT30171710Helianthus annuusTrifolium pratense11.3980.7784.76210forward
CNT30663243Helianthus annuusTriticum dicoccoides10.6975.4886.29197forward
CNT30309961Helianthus annuusCamelina sativa11.9938.1779.19221forward
CNT30371341Helianthus annuusOryza glumipatula7.0555.7987.69130forward

Expression of CNT30213268

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MDCPGKVSTSLTMSSSATLSVRKIPIHTPIRSSLVGAQ*

>peptide 2 (87 aa)
MKKIKGETKFTFSTNKQNLQNDNKNPWKKTQYLTFLMKNLKKPKIYRCSFHHHIKCSRHLHFLFLFVRCIYLQVSYILILCLIKHLR*

>peptide 3 (32 aa)
MSGVPPLSSQASFQWFQHQLLRSTSSLRHRTL*

>peptide 4 (32 aa)
MVILRSLTYRCLFMVWFWSWWSHWKQLRYPLG*

>peptide 5 (91 aa)
MRGAYSVEKSLPVTIIGTRGFSSLVALTIWLLTVYCVVPPILPAPASRSLMKRQHIFPFLMISAASRYRCLMSFAGSPAFPLSNSPALIMIG

>peptide 6 (65 aa)
MVLELVVSLEAASLSPGIEVRLAYILPFPDPINSFTIDEIMLCLFMVCVHCVKNGTRFGNGVKMH*

Sequence

>CNT30213268
CTAACAAGGGATTCTTAGTTTCTTACCGATGAAAAAGCTATTTTAAAGCTAAACTCTCAGTGTTTCTTTGAGAGTTGATACATTAATATCTTTTCAACTA
ATTATGTGTCTAACCAAACATTATATAGATAACTTTTAATCTATTTCTAGCCATTAAGAAAATGATATTAGACGAGCTATAGGGATCCGTTTGTTAGTGC
GATTTGCATACATTTATGTCTATTATTGTTGATAATGCGAGTAGCAATCGCACTCAAGGGTTTGATAGGCAAAACGGGGTAATCCTTGCATTCTAAAAGG
GGTGTTTATTTAGTTGCATATTGGACTCGATTAGCTACACCAATTCTGTTTTGAAGGGATGTTTATTAAGTGAGTATGAGAATTTGAAGGATACGCCGTT
GACGATGATGATGGGGTTTAATAAGTATTATGGTAATATTACGTAGTTTAACTTATCGGTGTTTATTCATGGTATGGTTTTGGAGCTGGTGGTCTCACTG
GAAGCAGCTTCGCTATCCCCTGGGATAGAGGTAAGGCTTGCTTACATCCTACCCTTCCCAGACCCTATCAATAGCTTCACTATAGATGAGATTATGTTGT
GTTTATTCATGGTATGTGTGCATTGTGTTAAGAATGGGACAAGGTTTGGCAATGGTGTAAAGATGCATTAAATCGAAACCGAAGAAACTGAAGAACACCT
TACTAAATGTGATTACATTTGAGAGCCCACATGAATGAAGAAAATAAAAGGTGAAACCAAATTCACTTTTTCTACCAACAAACAAAATTTACAAAATGAC
AATAAAAATCCATGGAAAAAAACACAATATTTGACATTCTTAATGAAAAACCTTAAAAAGCCTAAGATATATAGATGCAGCTTCCATCATCATATCAAGT
GTTCCAGACATCTGCATTTTCTATTCCTTTTTGTCCGCTGCATATATTTACAAGTTAGTTATATTCTTATATTATGTTTGATCAAACATTTGAGGTAATT
AAGAGTAAGTTTGTGGGCTAACCAAAAAATTTGCCGGTTTCCATGGCATCCTTGTTAGCGTCTCCAAGAGCCGCGGAGTCCAGATAGGTTTCGGCCAATT
GGACTCTCTTCACGTTCTCTTGTTCCTGAACAAGCATAAATCCATACTCTAGGAGCTTCTCTATTGTCATCTTTGGTTGCTCGAATGTCGGGGGTCCCTC
CCTTGAGTTCACAAGCTTCTTTCCAATGGTTTCAACACCAACTTCTCCGATCCACTTCCTCACTTCGTCATCGTACACTCTAGCCCTCAACGCGCCAAAG
AAATCTAATTAAAACCACCAAACACATTGTAACAAATGTTCCGTCAGTTTGTTGGTGATTTTAGTGTCATCGTAATCATTTCAGTATGACGTATAATTTA
CTTAATACCGAAGGGAAATATTACCGATGGATTGTCCTGGGAAAGTATCTACTAGCTTGACAATGTCTTCGTCGGCCACATTGTCAGTACGGAAAATACC
GATACACACACCAATACGGTCCTCTCTAGTGGGAGCCCAGTAGAACTTTTCCATACGTCCGTCACGGATGAGAGGAGCATACAGCGTCGAAAAATCGTTA
CCAGTGACGATAATTGGGACACGTGGGTTCTCCTCCTTGGTAGCGTTGACCATCTGGTTGTTGACTGTGTATTGTGTTGTTCCACCCATTCTACCTGCAC
CAGCATCAAGATCGTTGATGAAGAGGCAGCACATTTTCCCCTTCTTGATGATATCGGCTGCTTCACGGTACCGTTGTCTGATGAGCTTTGCGGGCTCTCC
AGCGTTTCCACTTTCCAATTCTCCGGCGCTCATCATGATAGGT