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Detailed information on CNT30213201


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30403856Helianthus annuusBeta vulgaris47.8847.7382.31147forward
CNT3081558Helianthus annuusBrassica juncea28.0110.7484.8886reverse complement
CNT30128358Helianthus annuusCorymbia citriodora21.8224.2888.0667reverse complement

Expression of CNT30213201

Peptides detected in this lncRNA

>peptide 1 (46 aa)
PGLVALACNSSEGIKDGWTVTQSSQVGSIGAQAGLPVPSCELVHVS*

Sequence

>CNT30213201
ACCGGGCTTGGTAGCGCTTGCCTGTAACTCAAGTGAGGGTATTAAAGATGGTTGGACAGTGACTCAGTCCAGTCAGGTTGGCTCCATTGGTGCACAAGCT
GGCTTGCCCGTTCCAAGTTGTGAGTTGGTCCATGTGTCTTGAGCGAAGGCTTGGGTCACGTGGTTCCTAAAGCAGGGGGCACTGCGTAAGGCTGGCTTCA
CAGAGCTGCGAAAACCCCTCGCTCACGACAGTGGAAGGATAACGAGCCGGGGCTCCATGGGTCTGTAATAATCTGTTGGGCTGTCTCAAATGAACAACCA
TCTTTTT