Detailed information on CNT30212924


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727740Helianthus annuusCorchorus capsularis46.8947.0481.82143forward
CNT30541676Helianthus annuusBrassica napus46.5646.5683.8142forward
CNT30235726Helianthus annuusBrassica oleracea45.5745.4282.73139forward
CNT30262041Helianthus annuusBrassica rapa45.2545.2584.06138forward
CNT30704539Helianthus annuusPrunus avium27.877.9388.2485reverse complement

Expression of CNT30212924

Peptides detected in this lncRNA

>peptide 1 (31 aa)
PGLVALACNSSEGLKDGWTVTQPSQVGSVGA*

Sequence

>CNT30212924
ACCGGGCTTGGTAGCGCTTGCTTGTAACTCAAGCGAGGGTCTTAAAGATGGTTGGACTGTGACTCAGCCTAGTCAGGTTGGTTCCGTTGGAGCATAAATC
GGCTTGCCCGTTCCAAGTAGTGAGTTGAACCATGTGGCTTGAGCGAAGGCTTTGGTCACGTGGTTCCTAAAGTAGGGGGCACTGCGTAAGGTTGGCTTCA
CAGAGCTGTGAACACCCCTCGCTCATGACAGTGGAAGGATAAGTCGGGGCTCCATGGATCTATAAGAATCTACTGGGTTGTCTCAAATGAACAACCTTCT
TTTTT